Paenibacillus polymyxa M1: PPM_0122
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Entry
PPM_0122 CDS
T01968
Symbol
rbcR1
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_0122 (rbcR1)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPM_0122 (rbcR1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_20
GerE
HTH_28
PBP_like_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CCC83059
LinkDB
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Position
complement(158795..159673)
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AA seq
292 aa
AA seq
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MNLSLLKLHIVELLNKHHKITTVAELLGLKQPTVTFHMKNLEREFGVKLFDTRMGKIILT
DAGNALLHYATKINALAAEAERVVREFDTLQRGSIRIGASYVPATYLLPAVLHRFAREHP
GIHISLSVKTAPVIKDMLARHEIDLGIISAEPFQSPTLLSESLGEDELVLICSPTHPLAS
ETDLTSERIASSSFVLHGKDSSTRHATDKWLERGRRRLPSYLELDSLEAIKQAVMLGEHI
SFVSRIAVQSEVERGLLVVRPIPGQPVERHIYMVSNRDRHRSALIHRFTEYL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttaagtcttctaaagttacatattgtagagctgctgaacaagcaccataaaatt
accaccgtagccgagcttctcggcctaaagcaacctactgttacttttcatatgaaaaat
ctggagcgtgaattcggagtaaagctgtttgacacacgtatgggcaaaatcatcctgacg
gatgccggaaatgccctactgcactatgccaccaagattaatgcacttgcggctgaggcc
gagcgggttgtccgtgagttcgatacactccaacgaggcagcatacgtattggcgcaagc
tatgtacctgctacctatctgcttcctgccgtgctgcatcggtttgcccgcgagcatccg
ggcattcacatctccttatccgtgaaaacagcgcccgtgatcaaggacatgcttgctcgc
cacgaaattgaccttggcattatttcggcagagccgtttcaatcccccacgttactctca
gaatccttgggggaagatgaactggtgctcatctgctcacccactcatccgctcgctagc
gaaaccgatttgacatccgagcgtatcgcttcttcctcttttgtattgcatggaaaggat
tccagcacacgccacgcgactgacaaatggctagagcgcgggaggcgccggcttccatcc
tatctggaattggattcactggaggccatcaagcaggcggttatgctgggagaacacatc
tcctttgtctctcgtattgctgttcaatcagaggttgaacggggtttactggttgtaagg
cctattccgggacagcctgttgaaaggcacatttatatggtcagcaacagagatcgtcat
cgctctgcgctgatccacagattcactgaatatttatga
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