Paenibacillus polymyxa M1: PPM_0128
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Entry
PPM_0128 CDS
T01968
Symbol
rpoE1
Name
(GenBank) replicase polyprotein 1ab
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PPM_0128 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppo03021
]
PPM_0128 (rpoE1)
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_0128 (rpoE1)
Transcription machinery [BR:
ppo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PPM_0128 (rpoE1)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PPM_0128 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Mnd1
BUD22
Motif
Other DBs
NCBI-ProteinID:
CCC83065
LinkDB
All DBs
Position
166606..167157
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AA seq
183 aa
AA seq
DB search
MSTPLNLKIDPEKVHETPMVDLAFMVLKAANTPYYYRDLMNEVAKLRGLSDEEINDVIAQ
LYTEINIDGRFACVGTNLWGLKRWYPVDKSEDALTGAKRPRIINDEDDDDEDDYHEEEET
YNSDDDFDADSEDEDGEDELFDGEDDDDSDDDVVIDDEDLSDEEDTDDENDDESIEDDDD
SLR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaccactcaacttgaagattgacccggagaaagtccacgagactccaatggtg
gatttggcatttatggtattgaaagcagccaatactccatattattaccgtgacctgatg
aatgaagtcgccaaattgcgcggcttgtccgacgaagaaattaatgacgttattgctcag
ctatatactgaaatcaacattgacgggcgttttgcctgtgtcggtacgaatttgtggggc
ttgaaacgttggtatccggtagataaatccgaagatgccctgacaggcgccaagcgtcct
cgtattattaacgatgaagacgatgacgatgaagatgactatcatgaggaagaagaaaca
tacaactccgatgacgacttcgatgcagatagcgaagacgaggatggcgaagacgagctg
ttcgacggagaagatgacgatgatagtgacgatgacgtagttattgacgatgaagacctc
agtgatgaggaagatacagatgatgaaaatgatgatgagtcgatcgaagacgacgacgat
tcacttcgttag
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