Paenibacillus polymyxa M1: PPM_0162
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Entry
PPM_0162 CDS
T01968
Symbol
yvcJ
Name
(GenBank) UPF0042 protein
KO
K06958
RNase adapter protein RapZ
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppo03019
]
PPM_0162 (yvcJ)
Messenger RNA biogenesis [BR:
ppo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPM_0162 (yvcJ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CCC83099
LinkDB
All DBs
Position
205703..206602
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AA seq
299 aa
AA seq
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MTDNLKNAAPWATLIIITGMSGAGKTIAVQSLEDLGFFCVDNLPPVLIPKFAELIEQSNG
KIGKVALVIDLRGREFFTALSESLNYIKDHFTIHCEILFLNANDGVLVQRYKESRRRHPL
APDGMPLDGIRLERKMLEELKSSATQVIDTSTMKPATLKARIISRFSHLESSMLSVNITS
FGFKYGIPIDADLVFDVRFLPNPHYVDQLRPHTGQDSDVYDYVMKWPETQAFLTKLLDML
HFLIPQYRKEGKSQVIIGIGCTGGKHRSVAISEYLGKMLGASETESVSVSHRDADRDRH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaatctaaaaaatgctgcgccgtgggcaacgctcattattattacggggatg
tcaggcgcagggaagaccattgcggtgcagagccttgaagacttgggcttcttctgcgtt
gataatttaccccctgtgctgattcccaaatttgccgagttgattgagcagtctaacggt
aaaataggcaaagtggctcttgtcattgatttacgcggacgagaatttttcaccgccttg
tcggaatcgcttaattatattaaagatcattttacgattcattgtgaaattttattcttg
aatgcgaatgacggtgttctcgtacagcggtacaaagaaagccgtcgacggcatccgctt
gctccagatggtatgcctttggatgggattcgtttggagcgtaagatgttggaggaactc
aaaagctccgctacacaggttattgatacaagtacgatgaagcccgcaaccttaaaggcg
aggattatttcgagattttctcatctggagagcagtatgctgtccgtgaatattacttct
tttggcttcaaatatggtattcccattgatgccgatcttgtattcgatgtgcgcttcctg
cctaatccccactatgtggaccagctacgtccacacacgggacaggatagcgatgtatat
gattatgtcatgaagtggccggagactcaggcgttcctgaccaagttgctggatatgttg
cactttttgattccgcagtatcgcaaagaaggtaaaagccaggtcattatcggtattggc
tgtactggaggtaagcatcgttcagttgcaatatcggagtatttaggaaaaatgctgggt
gccagcgagacagaatccgtttctgtttcgcatcgggatgctgatcgggaccggcattaa
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