KEGG   Paenibacillus polymyxa M1: PPM_0477
Entry
PPM_0477          CDS       T01968                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00230  Purine metabolism
ppo00240  Pyrimidine metabolism
ppo01100  Metabolic pathways
ppo01232  Nucleotide metabolism
Module
ppo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
ppo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PPM_0477 (nrdA)
   00240 Pyrimidine metabolism
    PPM_0477 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppo03400]
    PPM_0477 (nrdA)
Enzymes [BR:ppo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PPM_0477 (nrdA)
DNA repair and recombination proteins [BR:ppo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PPM_0477 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: CCC83414
LinkDB
Position
complement(605421..607754)
AA seq 777 aa
MPQLVTKPNNRQLAFDEIRISVYADRVLSGLDKLDKDRLIRGVTSKLRRDEVTGDEISNA
FAMAALELVSKEEPDWKFAAARALLTSLYKKAATHRRYKSYADEPYGAFYPLITDLVQKG
IYRQELLDCYTKEQIDELGDSILPQNDLLFDYIGLLTLSERYLANDFDGRVMELPQERYM
IIAMYLMHQEPADKRMELVKEAYWAMSNMYMTAATPTMSNAGKKVAGQLSSCFIDTVDDS
LEGIFDSNTDVARLSKMGGGIGVYLGKVRARGSDIRGHKNTSSGVIPWIRQLNNTAVSVD
QLGTRKGAIAVYLDVFHKDILAFLDLKLNNGDERMRAHDVFHGVCLPDLFMERVEARGEW
NLFCPHEVKKVMGWKDDKGRPLGLEDFYDEAFGSGSFREKYEEASKHPILSRITVPAIDI
MKRLMKSQLETGTPYMFYRDTVNRANPNRAHGMVYSSNLCTEIMQNQSATVVEKEELVTK
DGQTRIVISKIPGDFVVCNLNSIHLARAVPAGVLDRLVPIQVRMLDNVIDINNIEVLQAQ
YTNSQYRAVGLGTFGLHHLLALEGIRWESDEAVTYNDHLYEKINYLAVKSSMELAKEKGR
YAKFEGSDWATGHYFTSRGYTDGTREGKFVTTSEWSELAEEVQQNGVRNAWLFAIAPNGS
TSIIAGSTASIDPLYELLSYEEKTTYKIANPAPDLNEKTIWYYKTAFLLDQHASINMASA
RQRHIDQGQSFNLYVRPDIKATEFLELHIHAWKSGMKSTYYVRSRALTIEECESCAS
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgccacaactcgtaaccaaaccaaacaatcgccagttggcttttgatgaaatacgtata
tccgtatatgctgaccgtgtgctcagcgggctggacaagctggataaagatcgacttatt
cgcggtgtaaccagtaagctgcgccgggatgaagtcacgggggatgaaattagcaatgca
tttgcaatggctgcccttgaactggttagcaaggaagaaccggactggaaatttgccgct
gcgcgtgctttgctcacttctttatataaaaaagcagctactcaccgccgttacaaatcg
tatgcagacgagccttacggcgccttttatccactgatcaccgatttagttcaaaaagga
atctaccgtcaagagctgcttgactgctacaccaaggagcagattgatgaactcggcgat
tccatattgccgcagaatgacctgctattcgactatatcggactgttgacgctgtctgag
cgctatttggccaatgattttgacggacgcgtgatggaacttccgcaagaacgctacatg
attatcgcaatgtacctgatgcatcaagagcctgccgacaagcgtatggagttggttaag
gaagcatactgggcgatgagcaacatgtacatgacagcagctacacctaccatgtctaat
gccggaaaaaaggtggctggacagctttccagctgctttatcgacaccgtagacgactca
ctggaaggtatttttgattccaataccgatgtagcccgtcttagcaaaatgggtggcggc
atcggcgtatacctcggtaaagtacgagcgcgcggctccgatatccgcggacataaaaat
acaagctctggtgttattccttggattcgccagttgaacaatacagcggttagcgtagac
caactgggtacacgcaaaggtgcaattgctgtttatctggacgtattccacaaagacatt
ctggcattcctggacctaaagctgaacaacggtgacgagcggatgcgtgcgcatgatgtg
ttccacggcgtatgtctacccgatctgttcatggagcgggtcgaagcacggggcgaatgg
aatctgttctgtccgcatgaagtgaagaaggtcatgggctggaaagatgacaagggtcgt
ccactgggactggaagatttttatgatgaagccttcggttcaggctccttccgcgagaag
tatgaggaggcgtcaaagcatccgatcctctctcgtattacagtgcctgccattgacatc
atgaagcgtctaatgaaatcacagttggaaacaggtacgccgtacatgttctaccgcgat
acggtaaaccgggctaacccgaaccgtgcccatggtatggtgtattcctccaacctgtgt
acggaaattatgcaaaatcaatctgcaacggtagtagaaaaagaagaactggtcaccaag
gacggacaaacacgcattgttatttccaaaattcctggcgactttgtggtgtgcaacctg
aactccattcatctggctcgtgctgttccggcaggtgtgctggatcgtctcgtaccgatt
caggtacgtatgctggataatgttattgacatcaacaacattgaggtgctgcaagcacaa
tacacgaacagccaatatcgtgcagtcggcttgggtacatttgggctgcatcatctgctc
gcacttgagggcatccgctgggagtccgatgaagcggtaacctataacgatcatttgtat
gaaaaaatcaactacctggctgtaaaatccagcatggagctggcgaaagaaaaaggccgt
tatgccaaattcgagggttccgactgggcgaccgggcattatttcacttcccgtggctat
acagacggtacacgtgaaggcaaattcgtcactacatccgagtggagcgagcttgcggaa
gaagtccaacaaaacggtgtccgtaacgcatggctgttcgccatcgcgcctaatggttcc
acgtccatcattgcaggctctaccgctagcattgatccactgtatgagttgctttcctat
gaagagaaaacaacctacaagatcgctaaccctgcaccagacttgaatgaaaaaaccatc
tggtactacaaaacagctttcttgctggatcaacatgcttcgatcaacatggcttctgca
cgtcagcgtcatattgaccaaggtcaaagctttaacctgtatgtgcgcccagatattaaa
gctaccgaatttttagagctgcacatccatgcttggaaatcaggtatgaagtcgacctat
tatgtacgcagccgcgcactgacgattgaagaatgcgaaagctgcgcatcctaa

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