Paenibacillus polymyxa M1: PPM_0629
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Entry
PPM_0629 CDS
T01968
Symbol
treR
Name
(GenBank) HTH-type transcriptional repressor yvoA
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_0629 (treR)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PPM_0629 (treR)
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_41
HTH_Crp_2
Rrf2
HTH_36
HTH_DeoR
Fe_dep_repress
HTH_7
DnaD_N
TrmB
SAMD1_WH
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CCC83566
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Position
768638..769387
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AA seq
249 aa
AA seq
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MTKNIFLQIYQEYSGRIQTGELAPGSKMPSENELAREYNTSRETVRKALHLLAQNGYIHK
IKAKGSFVLDIGRMDFPIGGLVSFKEMSERIGRKSQTIVHKNQLIPVPDDIATHLEIDKD
KYLVWEVIRAREIEGECVILDKDYFRSDIVPVLTEEISRESIYEYLEGELHLPISYAKKV
VSVEDADEEDRKLMDLQNYTHVVVVRNYVYLEDTTLFQYTESRHRLDKFQFVDFARRSHG
EERKSDFLS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgactaagaatatatttttgcaaatttatcaagagtactcggggcgaatccagacaggc
gaattggctcctggttcgaaaatgccctctgaaaatgaattggcccgggagtataacact
tctcgtgagactgtgcgtaaggcacttcacttgcttgcacaaaatgggtatatccataaa
ataaaggctaaaggatcttttgttctggatatcggacggatggattttcctataggagga
ttggtcagtttcaaagaaatgtctgagcggattgggcgtaaatcacaaacgattgttcat
aaaaatcagttgattcccgttccagatgacatagctactcatcttgagattgacaaagat
aagtatttggtttgggaagtcattcgtgcgcgtgaaattgaaggtgaatgtgtcatactg
gataaagactactttcgatcagacattgtccctgtgcttaccgaggaaattagtcgtgaa
tctatctacgaatatctggagggggaactccatcttccaatcagttatgctaaaaaagtc
gtttctgtagaagatgcagatgaagaagaccgtaagctaatggacctccagaactatact
catgtggttgtagtacgtaactatgtttatctggaagacaccacattgttccagtatacc
gaatcaaggcatcgactggacaaattccaattcgtcgattttgccagacgttcccacggt
gaagagagaaagtctgattttttaagctga
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