Paenibacillus polymyxa M1: PPM_0635
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Entry
PPM_0635 CDS
T01968
Symbol
M1-820
Name
(GenBank) collagen alpha-5(VI) chain
Organism
ppo
Paenibacillus polymyxa M1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
CCC83572
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Position
complement(776706..778442)
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AA seq
578 aa
AA seq
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MKHKRPFRFSGASKKDEDCKPPRDNRSIEALLKLIHELTSIVPLVFANPSAANVSLLQQI
LRQLLSLAKSLRLRSGAKADLLAALELAIVALEATPFSPISVGTTLQQLLDALLSIVLQE
SLNSTLKDSLIRAIRTAGTTVSNALSEPYLSGEPGPQGPPGPVGPGGAPGPAGVPGPPGP
PGPVGPGGAPGPAGVPGPPGPPGPVGAAGPIGAEGPAGPVGAAGPIGAVGPAGPAGPAGG
VTGATGATGADGLVGPAGATGPTGADGLPGAVGAVGPAGATGPTGADGLPGAVGAAGPAG
ATGPTGADGLPGAVGAAGPAGATGPTGADGLPGAVGAVGPAGATGPTGADGLPGAVGAAG
PAGATGPTGADGLPGAVGAVGPAGATGATGVGGATGATGVTGATGSGAIIPFASGGPAIL
TTVLGGLVGTTSLIGFGSSATGIGLVNGVIDLTGTLVGPLINFAFSVPRGGVITSITGYF
STTAALTLLGSSVSITAQLFSSPTPNNTFIAVPGATVTLTPPLTDIVALGTTSSGIATGL
AIPVTAQTRLLMVFSATATGVSLVNTVVGYASAGVTIT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaagaccgttcaggttcagtggtgcttcaaaaaaagacgaggactgcaaa
ccaccaagagataatagaagtatcgaagcgcttctcaagcttattcatgaattgacctcg
atcgtcccacttgtattcgcaaacccttctgcggctaatgtatctttattgcaacagatt
ttaagacaattgctgtctctggcgaaaagtttaagacttagaagcggggctaaggcagat
ttactggcggcgttggaacttgctattgtagcattagaagccacacctttctctccgatc
agcgtaggtactacattacagcaactgctggatgccctattgtccatcgttctacaggaa
tccctcaattcaactcttaaagacagtttaatccgtgcaatcagaactgcgggtacgacg
gttagcaacgcactaagtgaaccgtatttgtcaggggagcccggcccacaagggcctccg
ggacctgtggggcctggtggtgcgcctggtccagcaggtgtgccgggcccaccaggacct
cccggacctgtggggcctggcggtgcgcctggtccagcaggtgtaccgggtccaccagga
cctcccgggcctgtaggggccgctggacctatcggagctgaagggcctgccgggcctgtc
ggagccgctgggcctatcggagccgtcggacctgctgggcctgctgggcctgccgggggt
gtaacaggcgccacgggcgctacgggcgctgatggtttggtcggacccgctggagccaca
gggccgactggcgctgatggactgccaggcgcagttggtgcggtcgggcccgctggagcc
actggaccgactggcgccgatggactgccgggcgcggttggcgcggccgggcctgctgga
gccactggaccgaccggcgctgatggactgccgggcgcagttggcgcggccgggcccgct
ggagccactggaccgaccggcgctgatggactgccgggcgcggttggtgcggtcgggccc
gctggagccactggaccgactggcgctgatggactgccgggcgcagttggcgcggccggg
cccgctggagccactggaccgaccggcgctgatggactgccgggcgcggttggtgcggtc
gggcccgctggagccacgggcgctacaggtgtcggcggagctactggagccactggagtt
actggagccaccggttcaggggcaattatcccgtttgcctccggtggtcctgctatactg
acaaccgttcttggcggattggtaggaaccacaagtttgattggtttcggaagctcagct
acaggtattggccttgtaaatggggttatagacctcacaggtacgcttgtaggaccactc
attaactttgctttttccgttccacgggggggtgtaatcacatccattaccggatatttc
agtacaactgctgctctaaccctcttaggatcatccgttagcattactgcccagttgttt
agttccccgacacctaataacacctttatagccgttcccggagctaccgttacattgact
cccccactaactgacatcgttgctttaggaacgacttctagtggtattgctactggattg
gctatacccgtaaccgcgcaaacccgtctgcttatggttttctctgccactgcgacaggc
gtttccctcgtcaacaccgtggtgggttacgcaagtgcaggtgtcactattacctga
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