Paenibacillus polymyxa M1: PPM_0672
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Entry
PPM_0672 CDS
T01968
Symbol
ydgC
Name
(GenBank) uncharacterized HTH-type transcriptional regulator ydgC
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_0672 (ydgC)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PPM_0672 (ydgC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_26
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
CCC83609
LinkDB
All DBs
Position
824882..825484
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AA seq
200 aa
AA seq
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MRAGVRSRESRRLLLEAGAEEFAQTGFYQTKVSSIAARAGLTQPDFYIHFESKEQMYEEL
VESFRNLVNETVQSMKVDPDQSETEILRRGQVFLEAIFRVLSNNPAITRVGFYQAADSVR
IKAEMAEHIKKHLMAAQRWGSCREELDPELTAECVIGLIERLTLTKLLPGRESPSVLAMQ
ARNLLYRGMLASEGYGTVES
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgggagtcagaagtcgggaaagtcgacggttgttactggaagcgggggctgaa
gagttcgctcagacggggttttatcagacaaaggtaagttcgatcgcggcgcgtgcagga
ttgacgcagccggatttttatattcattttgaaagcaaggaacagatgtatgaggagctt
gtggagagctttcgtaatttggtgaatgagacagtacagagcatgaaggtagacccggat
cagagcgagactgaaattttgagacggggacaagtgtttctggaggctatttttcgcgtg
ttgtctaataatccggcgatcactcgtgtcggattttaccaggcagcagactcggtgcgc
attaaggcggaaatggcagagcacatcaaaaaacatctgatggcagcacaacgatggggt
tcctgccgtgaggaactggaccctgaactgacagcagaatgcgtgatcggtttgatagaa
cggctgacgttaacgaaattgctgcctgggcgcgaaagtccgtctgttcttgccatgcag
gcacgaaacctactgtatcgtggtatgctggcttccgaaggatacggaaccgtagaatct
taa
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