Paenibacillus polymyxa M1: PPM_0971
Help
Entry
PPM_0971 CDS
T01968
Symbol
yfiB3
Name
(GenBank) lipid A export ATP-binding/permease protein msbA
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_0971 (yfiB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_0971 (yfiB3)
Transporters [BR:
ppo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPM_0971 (yfiB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DUF87
AAA_29
MMR_HSR1
AAA_22
ABC_ATPase
nSTAND1
Zeta_toxin
FtsK_SpoIIIE
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
CCC83908
LinkDB
All DBs
Position
1196240..1197916
Genome browser
AA seq
558 aa
AA seq
DB search
MLELTVELSQPYLISKIIDEGIRQQNLPVVWLWGGVLVGSAIIAFMAGISSSFFASHASQ
GFGYDVREKLYQKVQSFSYPVFKRFATSSLITRLTGDVTQVQDTVFMSLRFMTRVPLVVI
GSIVMALVVHFRLGLLLAVMAPVLFVFVLVTMRRTVTLFKGVQRRLDDVNGVIQENLTGI
RLIRVFVRMRHEIERFAHYGSELMKGTVSALRWTETTMPFILFTMNAGIIAVLWFGRGQI
STGDASVGQVVAVVNYSLRTIGALSALSGIVVVFSRATASTGRIREVLETPNVEGRGLEA
VPTQNTRMEGQVEMDRVSFHYPGSDLAVLKDISFKARPGERIAIMGATGSGKSSLVQLIT
RLYEEDEGHVRFDGKDARELDGAILREAIGYVPQEVLLFTGSIRDNIAWGLEHASLEQIQ
EAARMAQIHHMIERLPQGYDTMLGQRGVNLSGGQKQRLSIARALVRQPAVLILDDSTSAL
DAGTETALLNALDGLSCTTFLITQKISSTASADQILLLDEGRLIASGSHKHLMDSSDLYR
RIYESQYGKEESHVQGTH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgctggaattgacggtagagttatcgcagccgtatttgatctccaaaatcatagatgag
ggcattcggcagcagaatttgcctgtcgtctggttatggggcggtgtactggtgggcagt
gccattatcgcttttatggcagggatatcgagctccttttttgcttcgcatgcaagtcag
ggttttggctatgatgtgcgggaaaagctgtatcaaaaggtgcagtccttttcttatccg
gtattcaaacggtttgctacttcgtcgctgattacgcgcctgacgggagatgtcacgcaa
gtacaagatacggtgtttatgagcttgcgatttatgacacgggttccgctggtggtcatc
ggcagtattgtgatggccttggttgtacattttaggcttgggctgctactggcggttatg
gccccggtgctgttcgtatttgtgctggtgacgatgcggaggactgtcactttgtttaag
ggtgtccagcggcgcttggatgatgttaatggagtaattcaggagaatctgacaggcatt
cggcttatccgggtttttgtacggatgcggcatgaaattgaacgctttgcccattatgga
agcgaattgatgaaagggacggtgtccgctttacggtggacagaaacgacgatgccgttc
attttgtttacgatgaatgcagggatcattgcagtactttggtttgggcgcggtcaaatt
tccactggagatgccagtgttggacaggtggtggcagtcgtcaattattccttgcggacg
attggagctttgtctgccttgtccggtatcgttgtggtattttcccgggctactgcatcc
acaggacggattcgagaggttctggaaacacctaatgtagaggggcgagggctggaggct
gttccaacacagaacacacgaatggagggacaggtggaaatggatcgggtgagctttcat
tatccgggcagtgatttggctgtattaaaggatatatcctttaaggcacgaccgggtgag
cgaatcgctattatgggagctactggttcgggcaaatcctcacttgtacagttgattaca
cgtctgtatgaagaagatgaaggtcatgtgcgctttgacggaaaggacgctcgtgaactg
gatggagccatactacgtgaggcgattggctatgtccctcaagaggtactgctattcacc
ggctcgattcgggataatattgcgtgggggctggagcatgcgagtctggagcagattcag
gaagccgcgcgcatggcgcaaatccatcatatgattgaacgcttgccacaaggctatgac
accatgctcggacagcgtggcgttaatctgtctggcggacagaagcagcggctttcgatt
gcccgcgcactggtgcgccagccggcagtgctgattctggacgatagcacaagtgcgctg
gatgcggggacggaaacagcattgctgaatgcacttgatggcctgtcctgcacgacattt
ctcatcacgcagaagatcagctcaactgcatcagcagatcagattttactgctggatgag
gggcgtctgatcgcaagtggaagtcataagcatctcatggatagctcggatctgtaccgg
cgtatctatgaatcacaatacggaaaggaggagtcgcatgttcaaggaactcattga
DBGET
integrated database retrieval system
