Paenibacillus polymyxa M1: PPM_0972
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Entry
PPM_0972 CDS
T01968
Symbol
yfiC3
Name
(GenBank) lipid A export ATP-binding/permease protein msbA
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_0972 (yfiC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_0972 (yfiC3)
Transporters [BR:
ppo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPM_0972 (yfiC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_22
ABC_membrane_2
AAA
AAA_16
TsaE
AAA_15
AAA_5
AAA_23
AAA_29
Rad17
DEAD
AAA_30
nSTAND3
DO-GTPase2
AAA_14
SRP54
AAA_24
AAA_25
RsgA_GTPase
AAA_28
MMR_HSR1
AAA_18
Zeta_toxin
NB-ARC
AAA_33
Motif
Other DBs
NCBI-ProteinID:
CCC83909
LinkDB
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Position
1197897..1199735
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AA seq
612 aa
AA seq
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MFKELIEPFRQSTPESGVLRNPAGAEGRSKAKAKNWSGTVGRIWAYLARRKAKLMLVLFM
VLLSSGLSLLGPYLVGVAVDDFLEGPGGRTWIYFLIGLGAVYLLNSLTSWLQNIWMIEIA
QETVYRMRFDLFSHLHRLPIPFYGKRQQGEIMSRLTNDIENVSSTLNSSAIPIFSSILTL
IGTLTVMLWLSPLMTLLTFIVVPLMAAGMRWITRRTGPLYKERQKNLGELNGYIEETLSG
QQIIKAFSQEKRVIRDFRERNDRIRLSGFWAQTISGFIPKLMNGLNNLSFAIVAGIGGIL
AIRGSITIGTIIVFVEYARQFTRPLNDLANQWNTLLSAIAGAERVFEILDEDEESKDERG
AVKLKHVEGAVRFTDVSFGYDEGSATLETISFEAKPGEMIALVGPTGAGKTTLIQLLSRF
YSPDKGTITLDGRDITTIERESLRSRMAFVLQDTFLFQGTIRENIRFGRLDATDEEVEQA
SKLANAHSFIMRMKDGYDKVLEANGSGISQGQKQLLAIARAILANPSILVLDEATSSIDT
ITEMKIQEGLERLMQGRTSFVIAHRLNTIRQADRILVLKDGRLDEQGSHEELLAHKGFYS
DLYYGQLRKQSS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggaactcattgaaccgttccgtcagtctacaccagaatccggtgtgttgcga
aatccggcaggtgctgagggacgaagcaaggccaaagcgaagaactggtctggcacggta
gggcgaatatgggcttatctggcccgtcgcaaggccaagctaatgctggtactgttcatg
gtgttgctcagctccgggctgtcgctgctgggaccatatttggttggcgtagcggtggat
gattttctcgaaggtccgggtggacgcacgtggatttattttctcataggtttaggggct
gtatatttactgaactcgctgacctcctggctgcaaaatatctggatgattgagattgcc
caagagacggtataccgcatgcgtttcgatctgttttcacatttgcatcgactccccatt
cctttctacggcaaacgtcagcagggagaaattatgagtcgtctgaccaatgatatcgaa
aatgtcagttctacgctgaacagctcggccattccgattttttcaagcatattgacgctc
atcggtacactcacagtgatgctgtggttaagcccgttgatgactctgctaacctttatc
gtggtgccgttaatggcagccgggatgcgctggattacacgccgcaccgggcctttatat
aaggaacgacagaagaacttgggcgaactgaacggatacatcgaagaaacgctgtccggt
cagcagattattaaggcattttcacaggagaagagggttattcgtgattttcgtgagcgt
aatgaccgtattcggctgtcaggtttctgggcacaaacgatttcaggctttatccctaag
ctgatgaacggactgaataatctcagctttgctattgtagcagggatcggtggcattttg
gccattcgcggctcgattacgataggaacgattatcgtctttgtagaatatgctcgccag
tttactagaccgctgaacgatttggctaaccagtggaatacactgttgtccgccattgcc
ggagctgagcgcgtatttgaaatattggacgaagatgaagagtccaaggatgaacgtggc
gcagtaaagctgaagcatgtagagggagctgtgcggtttacggatgtttcctttggttat
gatgagggaagcgctacgctagaaacgatctcttttgaagctaaacctggtgagatgatc
gcgctggtcggcccgaccggagcaggaaaaacgacactgatccagcttctttccaggttc
tatagcccagacaagggaacgattacactggacgggcgtgacattacgaccatagagcgt
gaaagcttgcgctcccgtatggcgtttgtgctacaggacaccttcctgtttcaagggacc
attcgtgaaaatatccgcttcggcaggctggatgccactgatgaggaggttgaacaagca
tcgaagctggctaacgcccactcttttatcatgcggatgaaggacgggtacgacaaggtg
ctggaagcgaacggcagcggtatcagccaaggtcaaaagcagctgctggcgattgcccgt
gcgattttggccaacccttccatcctggtactcgacgaggcgaccagcagtatcgacacc
attaccgagatgaaaatccaggaagggctggaacggctcatgcagggccgaacaagtttc
gttattgcgcatcggttgaataccattcgtcaggctgaccggattttggtcttaaaggac
ggccgtctggacgagcaaggctcccatgaggagttgctggctcacaaaggcttttatagt
gatttatattatggtcagttgagaaaacaaagctcataa
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