Paenibacillus polymyxa M1: PPM_0985
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Entry
PPM_0985 CDS
T01968
Symbol
ytrA
Name
(GenBank) histidine utilization repressor
KO
K07979
GntR family transcriptional regulator
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_0985 (ytrA)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PPM_0985 (ytrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
Rrf2
HTH_36
RPA_C
Fe_dep_repress
HTH_11
LexA_DNA_bind
HTH_24
CtsR_C
Peptidase_M16_C
TrmB
MarR
HTH_41
Binary_toxB
Motif
Other DBs
NCBI-ProteinID:
CCC83922
LinkDB
All DBs
Position
1218014..1218403
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AA seq
129 aa
AA seq
DB search
MFELDIRSRKPIYEQLMEKVKEMIMYGSLQPDEQLPSVRALSAQLTVNPNTIQKAYRELE
REGYIYSVQGKGSFVTPTQQQPQQMKRDEIRAALLKQMIEAVHFGFTQQEVDDIYVEAMQ
TKERGMSLD
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagctggatatccgcagccgtaagccgatctacgaacagcttatggagaaggtc
aaggaaatgatcatgtacggatcgcttcagccggatgagcaattgccttctgtacgggca
ttgtccgctcaacttacggtgaatccgaatacgattcagaaggcgtatcgcgagctggaa
cgcgaaggatatatctattccgttcagggtaaaggtagctttgtcacgcctacccagcag
caaccgcaacaaatgaaacgggatgagattcgggcggcattgttaaaacagatgatcgaa
gctgtccatttcggttttacacagcaggaagtggacgacatatacgtggaagctatgcaa
acaaaggaaagggggatgtcccttgattga
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