Paenibacillus polymyxa M1: PPM_1371
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Entry
PPM_1371 CDS
T01968
Symbol
ypcP
Name
(GenBank) 5'-3' exonuclease
KO
K23786
5'-3' exonuclease [EC:3.1.11.-]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppo03032
]
PPM_1371 (ypcP)
DNA replication proteins [BR:
ppo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PPM_1371 (ypcP)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_3_exonuc_N
5_3_exonuc
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
CCC84308
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All DBs
Position
1640836..1641732
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AA seq
298 aa
AA seq
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MTQRNEQSVMLVDGMALLFRAYYATAANGYIRRTKAGVPTNAIYGFIRYFWDAVQTFNPT
HVICCWDMGGTTFRGEHFAAYKGNRADAPDDLIPQFTLIREVTDSLGIPNIGAEGFEADD
CIGTLARHYSQNEDMDVMILSGDHDLLQLVDERTQVIIMKKGHGNYMVYTPETLLSEKGL
KPRQVVDLKGLMGDASDNYPGVRGIGEKTALKLVQEYDSIEGILENLDQLTPSVRKKIES
DLDMLHLSRKLAKIHCDVPVACALDSCLLTLDHVQIVDKFEQLEMKSLCTLMGVATGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaacgcaatgaacaatccgtaatgctggttgacggcatggccctgctttttcgt
gcttattatgcaaccgctgcaaacggttatatccgtcgtacaaaagctggagtaccaacg
aacgccatatatggttttattcgatatttttgggatgcagtccaaacctttaatcctaca
catgttatttgctgctgggatatgggcggaacgacattccgtggggaacattttgctgcg
tataagggaaaccgagccgacgcgccagatgatttgattcctcaatttactttgatccgt
gaagtgacggacagcctcggcattcccaacattggggcggaaggctttgaagcggatgat
tgcatcggtacgctcgcacgccattattcgcaaaatgaggacatggatgtcatgattcta
tcgggagatcatgatttacttcaattggtagatgagcggacacaagtcattattatgaaa
aaaggacatggcaattacatggtatataccccggagacgctgttgtctgaaaaagggctt
aagccgcgccaagtggttgacctcaaaggtctgatgggtgatgcaagtgacaattacccg
ggagtacgcggaattggtgaaaaaacggccctcaagctggtgcaggaatacgactccatt
gaaggcattctggaaaatctagatcaattgacaccgtcggtccgtaaaaagatcgagagt
gatttggatatgctgcatctttcacgcaaacttgctaaaattcactgtgatgtgcctgtt
gcatgtgctttagacagctgtctgttgacactggatcacgtgcaaattgtcgacaaattt
gagcaacttgaaatgaaaagcttgtgtacgttgatgggtgtcgcaaccggatcataa
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