Paenibacillus polymyxa M1: PPM_1485
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Entry
PPM_1485 CDS
T01968
Symbol
exoN1
Name
(GenBank) exonuclease domain-containing protein 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppo03019
]
PPM_1485 (exoN1)
03036 Chromosome and associated proteins [BR:
ppo03036
]
PPM_1485 (exoN1)
Messenger RNA biogenesis [BR:
ppo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PPM_1485 (exoN1)
Chromosome and associated proteins [BR:
ppo03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
PPM_1485 (exoN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
CCC84422
LinkDB
All DBs
Position
1763392..1763925
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AA seq
177 aa
AA seq
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MNYIIFDLEATCWENDRTRQNEIIEIGAVKVNVNLEIIGEFQTFIKPKLNPQLSDFCKSL
TSISQQDIDMATYFPQAIYKFQEWIGKEPYYLCSWGFYDKSQLKKDCELHKIRTEWIRNH
ISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISRIFVKIFDRLKL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaactacataatctttgatttagaagctacctgctgggagaatgatcgaacaaggcag
aatgaaattattgaaattggtgctgtcaaagtaaatgtaaatttagagattataggcgaa
tttcaaacttttattaaacctaaattgaacccacaattatctgacttctgtaagagtcta
acttcaatttcgcagcaagatattgatatggcaacatattttccacaagctatctataag
tttcaagaatggattggtaaagaaccctattatctttgttcttggggattttatgataag
agtcaactgaagaaggactgtgagttacataaaatcagaactgaatggattagaaatcat
ataagtattaaacatcagcatggaaaactaattggaaatgatcgtggagttggtatggag
agagctttaaagatgcttaatctgccattggagggtactcatcatagaggaattgatgat
gcaaagaatatctcaaggatttttgttaagatatttgaccgtttgaagctttaa
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