Paenibacillus polymyxa M1: PPM_1864
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Entry
PPM_1864 CDS
T01968
Symbol
lig1
Name
(GenBank) DNA ligase 1
Organism
ppo
Paenibacillus polymyxa M1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flg_hook
DUF6240
HpaP
Motif
Other DBs
NCBI-ProteinID:
CCC84801
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Position
2145291..2147417
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AA seq
708 aa
AA seq
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MNIGSVFRGLLGDVKAGEAKKLDMQPGQVVRGVVLKVSEDGDEAVLQIQGSQVRAKLETP
LQPGQTATFQVQPASSSGMTVLKPLNDAANMPQQTVALTDVLESVGLPDTAQNRELIQAM
QKNGVPLTSENAASLQEALSKQSGNVQLGTFVQAAAVAFQRGLPLTAESINGLRQTMFGP
PLNDLLSSLEQELEAVLKQQGQGTPTDRSVGEATTIKSTDRTSVSPTGTSSVVIAEGQEG
QALTLSKDASASAATKQAETGQQVTGGKELLKGTQAANLAATVSEASVLATDSDTSAGST
AFASNGTASEKPQAVSGRGATVVLDAGANAPESGAADALNGSRVKAEQQQQATAAGTQLK
DADGAPTPATAESTGTKSALNAVTADRPSAQQAAGSTLPSATNNATVPEAPLQRLRLLLQ
ELRAAVPPELSTAAPDQSSAEVTQPAAGASRTADATASQSAAPSMQLSPTEDPWVGRVLK
LLGAEHEQQVHRSTAQLAQGAAARTEPPEGVLQTLPGLAATTDNSVTAAADTVKGALLQL
MSSEDLPSALKEAAQQVVQHLTGQQLLLNTDRTAPFAQVHMFIPFIGPDGRETATIQIQS
RRGKRGELDASNCRLWFDLDMKGLGPTLVDVQVVDRIVSLKLHNDQEWAASLLTSGRESI
RTALESLGYQLLTLRTEPMPTRAEQSSPASSEVQSYVPQPYKGVDLKI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggatctgtattccggggattacttggagatgtgaaggcgggagaggcgaaa
aaacttgatatgcagccaggccaggtcgtaagaggagtcgtattaaaggtgtctgaggac
ggcgacgaggctgtattgcaaatacagggttctcaagtcagggcaaagctggagacccct
cttcaacctggacagactgcaacgtttcaggtacaaccggcttcttccagcggaatgact
gtgcttaagcctctgaatgatgctgccaatatgccacagcaaaccgtagcgctgacagac
gtattggaatcggtgggactgccggatacagctcaaaacagggagcttatacaggcaatg
caaaagaatggtgtgccgttgacatcggaaaatgcggcttctttgcaagaagccttgtcg
aagcaaagcggcaatgtacaattgggaacgtttgtgcaggcagcggcagttgcctttcag
cggggacttccattaacggccgaaagcataaatggattgcgtcaaacaatgtttgggcct
cctttaaatgatttgttgtcatcgttggagcaagaacttgaagcggtgttaaagcagcaa
ggacagggaacgcctactgaccgttcagtaggggaagcaaccacaataaaaagcactgac
cgaacgtcagttagtccaacaggcacttcttctgtggtgattgcagagggacaggaaggc
caagctttaacattgtccaaggatgcttctgcctctgctgctacaaaacaggcagaaaca
ggacaacaagtcacaggcggcaaggaattgttaaaagggactcaggcagccaatctcgct
gctacagtaagcgaagcgagtgttttggctacagattcggatacttcggcgggatctact
gcatttgcatccaacgggactgcttcagaaaaaccgcaagcagttagcgggcgaggagcg
acagtggtattggatgctggtgccaatgcgcctgaatcgggcgctgctgatgcattaaac
ggctcccgcgtcaaagcggagcaacaacagcaagccactgcggcaggtacgcagcttaag
gatgccgatggtgctccaactccggccacggcagagtctacggggacgaagtctgcctta
aacgcagtcacggcagaccgtccttccgcacagcaagccgctggctctacgctaccatcc
gcgacgaacaacgctactgtgccagaggcgccgctccagcggctgcgcctcctgctgcaa
gagctgcgtgcagcagtgccacccgaactgagcacggctgcgccagatcagtcctcagca
gaggtaacgcagccagcggctggcgcttcgcggactgcggatgccactgcttcacagtct
gcggcgcccagcatgcagctcagccccacggaggatccgtgggtaggccgtgtgctgaag
ctgctcggtgcagagcacgagcagcaggtacaccgctcgactgcgcagctcgcgcaaggg
gcggcggcacgtacggagccgcctgagggagtgttgcagacgctgccgggtttagcggct
acgacagacaactccgtgacagcggccgcagacaccgttaaaggagcgctgctccagtta
atgagcagcgaagacctgccgtccgctttgaaagaggcggctcagcaggttgtacagcac
ctgacaggccagcagctgctgctaaatacagaccgaacggcgccttttgcacaagtgcat
atgtttataccgtttattggaccggacggtcgtgaaacagctacaatccagattcagtcc
cgccgtggcaaacgcggagagctggatgcctccaactgtcgactttggtttgatttggac
atgaaggggcttggtccaacgctggtggatgtgcaggttgtagatcggattgtaagtctc
aagcttcataatgatcaggaatgggcggcttcgctattaacgagtgggcgtgagtccatt
cgtaccgcgctggagtcgctaggctaccaacttttaacactgcgtaccgagcctatgccc
acaagggctgaacagagcagccccgcctcttcagaggtacaaagctatgtgcctcagccg
tacaaaggagtcgatcttaaaatatga
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