Paenibacillus polymyxa M1: PPM_1874
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Entry
PPM_1874 CDS
T01968
Symbol
sucD
Name
(GenBank) succinyl-CoA synthase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00020
Citrate cycle (TCA cycle)
ppo00640
Propanoate metabolism
ppo00660
C5-Branched dibasic acid metabolism
ppo00720
Other carbon fixation pathways
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01120
Microbial metabolism in diverse environments
ppo01200
Carbon metabolism
Module
ppo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPM_1874 (sucD)
00640 Propanoate metabolism
PPM_1874 (sucD)
00660 C5-Branched dibasic acid metabolism
PPM_1874 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PPM_1874 (sucD)
Enzymes [BR:
ppo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PPM_1874 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
CCC84811
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All DBs
Position
2155222..2156151
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AA seq
309 aa
AA seq
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MSILVDKHTKVITQGITGKTALFHAKGALDYGTQMVGGTSPGKGGTEVEITLENGQQVKL
PVFNTVSEAKEATGATASVIYVPPAFAADSILEAVDAELDLVICITEGIPVLDMIKVKRF
MEGKKTVLIGPNCPGVITPGECKIGIMPGYIHLPGHVGVVSRSGTLTYEAVHQLTTRGIG
QSSAVGIGGDPVKGSEFIDILHRFNEDPNTHAVIMIGEIGGTAEEEAAEWIRDNMTKPVV
GFIGGVTAPPGKRMGHAGAIISGGKGTAKEKIATLEACGIKVAPTPSEMGSTLVSVLEAR
GILNLCTTH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattttggtcgataagcatacaaaggtgattacacaggggattacgggaaaaacg
gcgttgttccatgccaaaggtgcacttgattacggtacacagatggtaggtggcacctct
ccaggtaagggaggcaccgaggtagaaattacactggaaaacggacaacaggtcaaactg
ccagtgtttaacacagtaagcgaagccaaggaagctacgggcgcaactgctagcgtcatt
tatgtgccgccggctttcgcagcggattccattttggaggctgtggatgcggaactggac
ctcgtgatttgtatcacagaggggattccggtacttgatatgatcaaggtcaaacgtttt
atggaaggtaaaaagaccgttctgattggccctaactgtccgggcgttattacgccagga
gagtgtaagattggtatcatgccaggttacattcatctgcctggtcatgtaggcgttgtg
tcacgtagtggtactttgacctatgaggcagtgcatcagttaaccactcgaggtataggt
caatcttcagcggttggtattggcggtgacccagttaaaggttcggaattcatcgatatt
ttacatcgcttcaatgaggaccccaacactcacgctgtcattatgatcggagaaatcggt
ggtacagctgaggaagaggctgccgagtggatcagggataatatgacgaagccagtcgtt
ggttttatcggtggtgtgactgcgcctccaggcaaacggatggggcatgcaggcgccatt
atttctggcggaaaaggaacggcaaaagagaagattgcaacgcttgaagcctgcgggatc
aaggtggcaccgactccttccgaaatgggctcgacactggtaagtgtgttggaagcacgt
ggtattttgaacttgtgtacaacacattaa
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