Paenibacillus polymyxa M1: PPM_2475
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Entry
PPM_2475 CDS
T01968
Symbol
rafA
Name
(GenBank) alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00052
Galactose metabolism
ppo00561
Glycerolipid metabolism
ppo00600
Sphingolipid metabolism
ppo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PPM_2475 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
PPM_2475 (rafA)
00600 Sphingolipid metabolism
PPM_2475 (rafA)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
PPM_2475 (rafA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
CCC85412
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All DBs
Position
2925663..2927897
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AA seq
744 aa
AA seq
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MASIQVNPKERTFHLTNKYCSYLFRVMENGQLEHLYYGKKMEYLGQYDRFIERSYRSVSV
GEFDGDLVTSLESIKQEFPSSGSGDFREPAVEIIQEDGSHVMEFIFDRYEVITEKPKIPH
LPATFCNEADEAETLLITLTDSLTGAVAVLAYTIFSELPVITRSVSITNSGNSVLRVNRL
MSMSLDLPDSEYEIIHLSGAWGRERHVERTPLRPGVQSIGSTRGISSHIHNPFLALAKPG
SQEHQGEIYAVNLVYSGNFLAQAEVDSYSTTRLSLGIHPDKFCWTLNPGECFYSPEAVMV
YSQSGLNGMSQAFHRLYNKHLIRSSWAERERPVLINNWEGTYFDFTEKKIVDMAKKASEL
GIELFVLDDGWFGQRNNDTSSLGDWFENREKLPNGISNLAKKINELGMKFGLWFEPEMVN
SDSHIMREHPDWVVGTPGRKRKHGRHQYVLDYSQPPVVDYLFKLMDDVLSSAHIEYVKWD
MNRCISEAYSLSLGKERQGEFFHRYVLGVYALYEKLITKYPEVLFESCASGGGRFDPGML
YYAPQTWTSDDSEAIERLKIQYGTSMAYPLSSMGAHVSTIPNHQVGRTAPLQTRSNVAYF
GVFGYELDPLALTEEECNIIKKQIQLYKRHQRLVTQGTFYRLLSPFEKNETAWMTVDAER
EHALVGWYQVLSRPNAAYSRLKLIGLDEMAVYFVEELDRRFTGSELMNIGLILTPPYKAD
QDFNIAEKYDFSSQLFTLTKETSS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctagtatacaagttaacccaaaggaacgtacatttcacttaacgaacaaatactgc
agttaccttttccgtgtcatggagaacgggcaattggagcatttgtattatggcaaaaaa
atggagtacctaggtcaatatgaccgttttattgaacgaagctaccgctctgtgtctgtc
ggtgagtttgatggtgacttggtaacatcattggaaagcatcaagcaggaatttccttct
tcgggaagtggagactttagagaaccagcagttgagatcatacaggaggacggttctcat
gtcatggagttcatctttgaccgttacgaggtcatcacggagaaacctaaaatcccccat
ctccctgctacgttttgtaatgaagcagatgaagcagagacactcctgatcacgctgacc
gattcccttacaggagcggttgccgtgcttgcatacaccatcttcagtgaactgcctgta
atcacgcgatccgtatccataacgaattccggaaatagtgttctgagagtcaaccgtcta
atgagcatgagccttgatcttcctgactccgaatatgaaattattcatttgtcgggggca
tggggtagggaacgacatgtggagcgtacaccactcagaccaggtgttcagtccattggg
agcacacgaggaattagtagtcatattcacaatccattcttggcgcttgccaaaccggga
tctcaggaacaccaaggagaaatatatgcagtgaatcttgtctacagcggaaactttctt
gcccaggcggaagtggacagctactcaactacccgactgagcctcggtattcatcctgac
aaattctgctggactctgaatcctggagaatgtttttattcgcctgaagcagttatggtc
tactcacagagcggtttgaacggcatgagccaggcgttccatcgcctgtacaataaacac
ttaattcgtagtagctgggctgaacgggaacgacctgtattgatcaataactgggagggt
acctactttgattttaccgaaaagaaaatagtggatatggctaaaaaagcaagtgaacta
gggattgagctctttgtcttggatgacggttggttcggtcaaagaaacaatgatacctcc
tcactcggtgactggtttgaaaatcgtgaaaagctaccgaacggaatctcaaatttggca
aagaagatcaatgagcttggtatgaaattcggtctttggtttgagccggaaatggttaac
tccgactctcatattatgagggaacatccggattgggttgtgggaacacccgggcgtaaa
cgcaagcatggacggcatcagtatgttcttgattattcccaaccgcctgttgtggattac
ctgtttaagttaatggatgacgtgctctcttctgctcatatcgaatatgtaaaatgggat
atgaatcgctgcatttcagaagcctattcattatctctgggcaaggaaagacagggcgag
tttttccatcgttacgtcctaggcgtgtatgctttatatgagaagctgattaccaaatac
cctgaggttttgtttgagtcctgtgcttccggtggaggacgatttgatccagggatgctt
tattatgctccgcaaacatggacgagcgacgatagcgaagctattgaacgtcttaagatt
cagtatggcacttccatggcctatccgcttagcagcatgggtgctcatgtgtcaaccatt
ccgaaccaccaggtaggcagaaccgcaccgctgcaaaccagatcaaatgtcgcctacttc
ggtgtattcggttacgaacttgatccattagctttaaccgaggaagagtgcaatataatc
aaaaagcaaatacaactgtataaacgtcaccaacgattagttacccagggaacgttttac
cgtctgctaagtccctttgaaaaaaatgagacagcttggatgaccgttgatgcagaacgt
gagcatgctctcgtcggctggtaccaggtactctcacgccctaatgcagcttattcacgg
ctaaagctcatcggactggacgaaatggcagtatatttcgtggaagaactggatcgacgt
ttcacaggcagcgagttaatgaacatcggacttatactcaccccgccttataaggctgac
caggatttcaatattgcggagaaatatgatttctcatctcaattatttactctaactaaa
gagacttcctcgtga
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