Paenibacillus polymyxa M1: PPM_2538
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Entry
PPM_2538 CDS
T01968
Symbol
mutS1
Name
(GenBank) DNA mismatch repair protein mutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPM_2538 (mutS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_2538 (mutS1)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PPM_2538 (mutS1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
MutS_III
AAA_lid_11
Motif
Other DBs
NCBI-ProteinID:
CCC85475
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Position
3001233..3003194
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AA seq
653 aa
AA seq
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MNETTMLRLEYDQIKTRVSECAFSYLGKHHAASMQPITDIRTIKIRLNETSEALQLIRHG
ASVPVPSLEGMEHILHLLGTGYMFSERDFSHLAQFIRSCMQLMKYMHAKADAAPTVSAYA
SSMYGMESLLSEIERCIYSGRVTDNASKELAKIRKKIAVTEERIKRKLDSLTSRHRSIMQ
ENMISQRNGRYVLPIKKEFRKQVKGNVLDESGSGQTVYVEPAEIVNLQFEQSANMAEESK
EEMKVLGDLTAMAESYNRELSINTETVGILDFLLAKAKYAMTLDAVSVELNDEGIIDIHG
ARHPLMANTMVPLDFSIGEGYSSLIITGPNTGGKTMALKSVGLLTLMVQSGLLVPVLQGS
RMAVFEDIVVDIGDGQSIEHALSTFSAHIRNMIGILETAGSSTLILIDEMASGTDPGEGV
GLSIALLEEFHRRRTTVVATTHFSEIKHFAENTPGFQNARMEFDTETLQPLYRLRIGEAG
ESYAYAIALKLGMWTRIIERSEAISAGRTSQNTQKSLVIPPSFDDKRPDDVCKPASKKAS
TDHTVAKQEKQENPLITRSFALGDSVYVGYLDRTGIVCKTEDERGNVGVLIQGQKLIINK
KRLVLHIAATELYPDDYDLDIVLETKENRKKRKLLARKHVQGLIIESPPENEK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaactacaatgctgcgtttggaatatgatcagattaaaacaagagtatctgaa
tgtgctttttcatacctgggtaagcatcatgccgcttccatgcaaccaattacagatatc
cgtacaatcaaaattcgtcttaacgaaacgagcgaagctttacagctcattcgccacgga
gctagcgtacccgttccttcattggaaggaatggagcacattctgcacctcttgggaacc
ggctatatgttcagcgagcgtgatttttctcatttggcccaattcatcagaagctgcatg
cagctgatgaaatatatgcatgccaaggcggatgcagctccaaccgtcagtgcttatgcc
tcttccatgtatggtatggagtcactcctatccgaaatcgagagatgcatttattcgggt
cgagtgacggataacgccagtaaagagctagctaaaattcgcaaaaaaattgcagttact
gaagaacgtatcaagaggaaattagactctctcaccagccgtcatcgatccatcatgcaa
gaaaatatgatcagtcagcgcaatggccgttatgtacttccgatcaaaaaggaattccgc
aaacaggtgaaaggcaatgtactggatgaatcgggaagcggtcaaacggtctatgttgaa
cctgcagagatcgtaaatctacaattcgaacaaagcgcaaacatggcagaggaatcaaaa
gaggaaatgaaagtgctgggagatctgaccgcaatggctgagtcatacaaccgggaacta
agcattaatacagagacggtaggcatactggattttttattggctaaagctaaatacgcc
atgaccctggatgctgtttctgtcgagcttaacgatgaggggattatagatatccatggt
gcacgtcacccattgatggcgaatactatggtgccgcttgatttctcaattggtgagggt
tattcctcgcttattattaccggaccgaatacaggcggaaaaacgatggctctcaaaagc
gtcggtctgttaacactcatggtgcaatccggcctgctggtacctgttttgcaaggcagc
cgcatggctgtattcgaggacattgtggtagacatcggggatggccaaagtattgaacat
gctttgagcaccttttctgcacatattcgcaacatgattggcattttggaaacggcaggc
agctctactctgatcctgatcgatgaaatggcttctggtactgatccgggagaaggcgta
ggcctatctatcgcactgctggaagaatttcatcgtcgacggacgacagtagtggctacc
acccactttagcgaaatcaagcattttgctgaaaacacaccgggatttcaaaatgctcgt
atggagtttgataccgaaacgttgcaacccttgtaccgacttcgcatcggtgaggctggg
gaaagctatgcatatgcaattgctttgaagctaggcatgtggactcgcattatcgaacgt
tcggaggccatttctgctggaagaacgtctcagaatacacagaagtctttggttattccc
ccttcttttgacgataaaaggcctgatgatgtatgtaaacctgcctctaaaaaagcatct
acagaccatacagtcgcaaaacaggaaaaacaagagaacccactcataaccaggtcgttt
gctcttggagatagtgtttatgtcggctacctagatcgaactggtattgtttgcaaaacg
gaggatgaacgaggcaatgttggagttttgattcaaggacaaaagctgatcataaacaaa
aagaggctcgttcttcacatcgcagcaacagaattgtacccagacgattatgatttggat
attgttttagaaacaaaggaaaatcgaaaaaaacgaaagcttctagcgcgcaagcatgtt
caggggctaatcattgaatctcctccggaaaatgaaaagtaa
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