Paenibacillus polymyxa M1: PPM_2662
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Entry
PPM_2662 CDS
T01968
Symbol
dnaB1
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPM_2662 (dnaB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppo03032
]
PPM_2662 (dnaB1)
Enzymes [BR:
ppo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PPM_2662 (dnaB1)
DNA replication proteins [BR:
ppo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PPM_2662 (dnaB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
FliG_N
divDNAB
NTase-conflict
Motif
Other DBs
NCBI-ProteinID:
CCC85599
LinkDB
All DBs
Position
complement(3134106..3135392)
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AA seq
428 aa
AA seq
DB search
MSNDLLNTELLEAEILGSFFRDPSLVSEVAVTLEPSLFTQPWHRNLLKMILELHRTEQEL
SMTMLVTVFEKHLEKVGGVSYLSKLASSAVAVSMLEQNIRKLIETDARRKALELVGEYRE
KFLDLSSGGFEELLDEFEQRSLDIRPKALLKDTAVDDIIQWYEDLVLKTQDPSRALGIMT
GWSALDRLMLGFQRTNLVVIGARTSMGKSAVANEIKMRATQRGHKVADFSLEMSKAQIYN
RMIANLCSIPLQAIRSGHLKPEQIERISMQMEFLRKIHIDDSRGVTAEYICSEMRRLKRQ
EGLDLVIVDYLQEVVEPAERNDNSGSGLHRVCQKLRKAAKDCDCALIGLSQVKQDVESRQ
NKRPFVSDLSGSAAISAVADDILLLYRDEYYNPDTPDPGILEINLAKQRNGPTGVVKLKF
EKDTQQIA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacttgctgaatacggagttacttgaggctgaaatattaggttcctttttt
cgagatccttcccttgtgagtgaagtcgctgtaacactagagccaagcttatttacacaa
ccttggcatcgcaatctgctgaaaatgatactagaactacatcggactgaacaggaacta
tccatgactatgttggtgacggtattcgaaaagcatcttgaaaaggtcggtggagtttct
tacctgtctaaactggccagctctgccgttgcagtttcgatgctggagcagaatatcagg
aagctcattgaaacagatgctcgtcgtaaagcgctggaattggtcggcgaataccgcgaa
aaatttttggatttgtcatcaggtgggtttgaggagttactggatgaatttgaacagcgc
tcactggatattcggccaaaagctttgctaaaggatacggcggttgatgacatcatccag
tggtatgaggacttggtacttaaaacgcaagatccttcccgagcgcttggcattatgacg
ggctggtcagcattggaccgactgatgctagggttccagcgtactaacctggtcgtcatc
ggagccagaactagcatgggtaagtcagccgtcgccaatgaaattaagatgcgggccacc
cagcggggacataaggttgcggactttagcctggaaatgtccaaggcgcagatttataac
cggatgatcgctaatctgtgcagcattcctttgcaagctatacgttcagggcatctgaag
ccggaacagatcgagcgtatttctatgcagatggagtttctgcggaaaattcatatcgac
gatagccgtggtgtgactgcggagtacatttgttccgaaatgcgccgattgaagcggcaa
gaaggacttgatttggtcattgtagattacttgcaagaagtggtcgagcctgctgaacga
aacgacaacagcggttctgggttgcacagggtttgtcagaagctacggaaggcggcaaaa
gactgtgattgcgcgttgatcggtttatcacaggtcaagcaggatgtggagagccggcag
aataaaaggccgttcgtttcagacttatcaggcagtgcggcaatcagcgcagttgctgac
gatatccttctgctgtacagggacgaatactacaaccctgacacaccagacccaggtatc
ttggaaatcaacctcgcaaaacaacgtaatggtcctactggagtggtgaaactcaaattt
gagaaagacacacaacaaatcgcgtag
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