Paenibacillus polymyxa M1: PPM_2688
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Entry
PPM_2688 CDS
T01968
Symbol
rnclZ
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_2688 (rnclZ)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PPM_2688 (rnclZ)
Transfer RNA biogenesis [BR:
ppo03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PPM_2688 (rnclZ)
Prokaryotic type
PPM_2688 (rnclZ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Aspzincin_M35
Motif
Other DBs
NCBI-ProteinID:
CCC85625
LinkDB
All DBs
Position
complement(3155973..3156905)
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AA seq
310 aa
AA seq
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MELYFLGTNAGVPTIQRNVTSIALRLLEERRSMWLFDCGEGTQQEVLRSPLKLSRLEKIF
ITHLHGDHLFGLPGLLSSRAYQGGTAPLTVYGPPGLQQYIELSLGISQSRINYQLHIVEH
TGGVLFDDGQFRVESALLDHRIDSYGYRIVEMDKPGKLNQELLERYGIKPGPVYGKLKRG
ESVEVEGGVILHPQDVLGSPKKGRIVTILGDTRPCPNTVVLARDATVVVHEATFLHDLAD
TAYEYHHSTALQAAEAAKAAGAGQLIMTHFSSRYKDQEQLQPLLEEARSLFPNSLLAEQH
VLLPVPDIGQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaattatattttctcggtacaaatgcaggggtacctacaattcagcgaaatgtaaca
tccattgctcttcgtttactggaggaacgaagaagcatgtggttgtttgactgcggtgaa
ggcactcaacaggaagtattgcgttcgccgctcaagctgagcagacttgaaaaaatattt
atcactcatttgcatggggatcatctttttggtctgccaggccttttgtcgagtagggca
tatcagggaggtacggcacctctgacggtatatggaccgcctgggcttcagcaatatatt
gagctatctttagggatcagccaatctcgtatcaattaccaactacatattgtggagcat
acgggcggggttctgttcgatgacggtcaatttcgggtggaatccgctttgctggatcat
cggatcgacagttatggctaccgaattgtagagatggataagcctggtaagcttaaccaa
gaactgttggagcgatacgggatcaagcctggcccagtgtacggtaaattaaagcgtgga
gaaagtgtggaagtagagggtggagttattctgcatcctcaggatgtattgggttcacct
aaaaaagggcggatcgtcactattttaggtgacacgagaccctgtccgaatacagtagtg
ctggcacgagatgcaactgtcgtcgttcatgaagccacatttctgcatgatctggcggat
acggcgtacgagtatcatcatagtacggcgcttcaggcagcggaagctgccaaagccgca
ggcgcggggcagttaattatgactcactttagttctaggtataaagatcaagagcagctt
cagcctttgctggaggaagcgcgaagcctattccccaattcattgcttgcggagcagcat
gtgttgttaccggtacctgatatcggtcaataa
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