Paenibacillus polymyxa M1: PPM_2769
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Entry
PPM_2769 CDS
T01968
Symbol
pacB
Name
(GenBank) terminase B protein PACase B protein; DNA packaging B protein
KO
K06909
phage terminase large subunit
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PPM_2769 (pacB)
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Gene cluster
GFIT
Motif
Pfam:
AAA_30
Terminase_3
AAA_19
Helicase_RecD
ResIII
DEAD
Terminase_6N
PhoH
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
CCC85706
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All DBs
Position
complement(3235346..3236770)
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AA seq
474 aa
AA seq
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MKTKDSPETKRRLQAFKKRIPEYRKNPTLFCQEMLKFYPDDWQASTLMDLANNPRVSVRS
GQGVGKTGLEAATALWFLSCFPYPKVICTAPTRQQLHDVLWAEINKWQSKSPVLKRILKW
TKTKIYMKNYEERWFATARTATKPENMQGFHEDYMLFVVDEASGVADPIMEAILGTLSGE
FNKILMCGNPTKTSGVFYDSHNKDRSDYKTRKVSCLDSPRTSKENIAMLKRKYGEGSDVW
RVRVEGEFPRGESDTFISLEAAEFAKDEVKIEPSGTKLFVGVDVARFGDDETTMYARMGG
KVVKTHFHHKQDTMTTTGWVLRLVDDVKAERTEMDEVEIRIDDSGIGGAVTDRLNEINEE
KSLGYTIIPVNNGSAAEDGHYGNLGAEQWGHVKEMLEANMSNYVLGKPGELQLPDDEKLI
TQLTSRKWRMGSNGKIFLERKEDMKKRGLPSPDRADAFVLSFANIKFKNVFSFG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaaggactcaccggagacgaaacggagacttcaagcattcaagaaaaggatt
cctgagtatcgcaagaatcccacattgttctgtcaagagatgcttaagttctatcctgat
gattggcaggcaagcactctaatggatttagctaataatcctcgtgtttcagtacgttca
ggtcaaggcgtaggaaaaacaggattagaagcggcaacagctctatggttcttgtcgtgt
ttcccatatccaaaggtaatttgtacagctcctacaaggcagcaactacatgacgtgtta
tgggctgagataaataaatggcaatctaaaagtccggtgctgaaacgaatccttaagtgg
actaagaccaaaatatacatgaaaaattatgaggaacgatggttcgctacagctcggaca
gcaaccaagcctgaaaatatgcaaggctttcatgaggactacatgctatttgttgtggat
gaggcatcgggtgttgctgatccaatcatggaagccattttaggtacgttgtcgggtgag
ttcaataaaatactgatgtgtggaaacccgacaaaaacgtcgggtgttttttatgattcg
cacaataaggatagatctgattataaaacacgtaaggtatcctgtttggacagtccgaga
acgagtaaagaaaacatcgctatgcttaaacggaaatatggagagggaagcgatgtatgg
cgcgttcgtgtagaaggcgagtttccccgtggtgaatctgatacattcatctctctggaa
gctgcggaatttgccaaagatgaagttaaaattgaaccttctggaacaaagctatttgta
ggtgttgacgttgcacgttttggagacgatgagacaaccatgtacgcacgtatgggaggc
aaggtggtaaagactcatttccaccacaagcaggacactatgacaaccacaggctgggta
ttacgcctggttgatgatgtaaaggcagagcgtacagaaatggacgaagtagaaataaga
attgatgatagtggaataggtggagctgtaacagatagattgaatgagattaatgaggag
aaaagtctaggctacaccatcattccagttaacaatggatcagcagcggaagacggtcat
tatgggaatctaggggctgaacagtggggacatgtcaaagaaatgcttgaggctaatatg
agcaactatgtgcttggcaagccgggtgaactgcaattgccagatgacgagaaacttata
acgcagctcacttcccgaaaatggcggatgggtagcaacggaaagatatttttagaacga
aaagaggatatgaaaaagcgcggcctaccctcaccggatagggccgacgcatttgtatta
tcttttgcaaatattaaattcaaaaatgtattttcatttggttga
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