Paenibacillus polymyxa M1: PPM_2813
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Entry
PPM_2813 CDS
T01968
Symbol
mutS3
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPM_2813 (mutS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_2813 (mutS3)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PPM_2813 (mutS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Rad17
AAA_27
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCC85750
LinkDB
All DBs
Position
complement(3272635..3275535)
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AA seq
966 aa
AA seq
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MLSTVIFDIMKDNYEFKRNEVWGLGNGMSKYTPMIEQYLSIKEQAKDAFLFFRLGDFYEM
FFDDAILASKELEITLTGREGGAAEKIPMCGVPYHSAENYIQRLIEKGYKVAICEQMEEA
SATKGMVRRDIVRVVTPGTVMEGKVLGDKSNNYMVCVTETDGMLALAACDLSTGELYVTS
VPDSKEWLLDEINIYEPSEMLGDGHLLDFVTSRMSPVGRRVVYTAWDKSKDDLVRDQFGE
ATWARLTEERRRCVSRLISYLNETQKRSLGQLTQISVYEPNHFMILDPFTRRNLELVETV
RERSKKGSLLWLLDRTETSMGARLLRRWIDKPLLSSNLIEERLEAVDKLYHQFIFREDVR
AQLKEIYDLERLVGRIAFGSANARDLIALKLSLAQIPSLRELCAESPSNTLRRIAQTLDS
CADLCTLIEEAVADEPPISVRDGGLIKEGYHQRLDELREASVNGKRWIAELEAKERVATG
IRSLKIGYNKVFGYYIEVTKSNLASLPEGRYERKQTLANAERYITPELKEKESLILEAED
KMVDLEYTLFSELRSKLNAEIPRLQKLAEQVAEIDVYQSLATVSAERGFVKPELTTGYDF
VVEQGRHPVVEAVMKDGGFIANNTVLEEADAHILLITGPNMAGKSTYMRQVALIAIMAQI
GCFVPAARAKVPMLDRIFTRIGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDELG
RGTSTSEGMAIAQAVIEFVHDTIGCKALVSTHFHELAHLEQGLTSLRNYSMAVQESGDKV
NFLRKLIPGAASSSYGIYCARLAGLPNNIIERANGLLYGFEQAAAQVTAGTETARGAKEG
TDLRTVPGTEEISPMSAKYADQTLRANGETAPPVQSGSQQATLVKEDTLQIVEDSGELEH
AASDVVQLSIFGEQDLAPSKPHSETVEANPIVRQILRKVKNADVMNMTPLQAMQLLNELK
NKANGL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgactgtcatttttgatataatgaaagataattatgagtttaaacggaatgaa
gtgtgggggttaggtaacggtatgtctaaatatacaccgatgatcgagcaatatttatct
ataaaagagcaggctaaagacgcatttttgtttttccgcctgggcgatttttacgagatg
ttttttgatgatgcgattcttgcatccaaggagctggaaattacactgactggtcgtgag
ggtggcgccgcggagaaaattccgatgtgcggcgtgccttatcattcagcagaaaattac
atacaacgcctcattgagaagggttataaggtggccatctgtgaacaaatggaggaagcc
tcagctaccaagggaatggtacggcgggatattgtccgtgttgtgaccccgggtacggtc
atggaaggcaaggtgctgggtgataaatccaacaactacatggtatgtgtcacagagacg
gacgggatgctggcgctggcggcatgcgacttgtcgacaggtgaactctatgtgacttcc
gtacctgattcgaaagaatggctattagatgaaattaacatttatgagccgtccgaaatg
ttgggagatggtcatttgctcgatttcgtgacctctcgtatgtcccctgttggaaggcgg
gttgtgtatacggcgtgggacaaatccaaagatgatctggtacgggatcaatttggtgaa
gccacgtgggcaaggcttacggaggaacgcagacggtgcgtatcgcgcctgatttcctat
ttaaatgaaacgcaaaaaagatcgttaggtcaactgacccaaatctcggtctatgagcct
aatcattttatgattctggatccatttacccgccggaatctggaactggtggagacggtg
cgtgaacgctccaagaaaggctcgttgctgtggttgctggatcgcacagagacatccatg
ggcgcacgtttgttgcgtcgttggatcgacaagccgctgttgagtagcaatttaattgag
gaacggttagaagcggtagacaagctataccaccagtttattttccgcgaggatgtacgt
gctcagcttaaagagatttacgacctagagcgtttggtaggacggatcgcttttggtagt
gctaatgcacgagatttgatcgccctcaagctgtctctggcccaaattccgtctttacgc
gagctgtgcgctgaatctccgtcgaatacgctgagacgaattgcacaaacattggacagc
tgtgcagacctgtgtacgctgattgaggaagcagtggctgatgaacccccaatttccgta
agagatggagggcttataaaggaaggctaccatcagcgtctagacgaactgcgtgaggcg
agtgtgaacggtaagcgttggattgctgagctggaggccaaagaacgagtagcaaccggc
attcggtcactcaaaatcggatacaacaaagtatttggttactacattgaggtgaccaaa
tccaatttggcttcattaccggaaggtcgatatgaacgcaaacagacgttggcgaatgct
gagcggtatatcacaccagaattgaaggaaaaggaatcgctaattctggaagctgaggat
aagatggtggatctggagtacacgcttttctctgagcttcgcagtaaactgaacgctgaa
attcctcgcctgcaaaagctggcagagcaagttgctgaaattgacgtgtatcagtcgctg
gcgacggttagcgcggaacgagggtttgtaaagcctgagctgacaacaggatatgatttt
gtagtggaacagggacggcaccccgttgtggaagccgtcatgaaagatggcggctttatc
gccaacaacacagtgttggaagaagccgatgcgcatattctactcatcaccggtccgaat
atggctgggaaaagtacgtatatgcgtcaggttgcactcattgcgattatggctcaaatt
ggctgctttgtcccggctgcacgtgctaaagtgccgatgctggatcgcattttcacacgg
atcggcgcagcggatgatctcattggcggacagagtacgtttatggtcgaaatggcagat
attcaagtcatgacggacaaggcaactccacgaagtctgattataattgatgaactggga
cgaggaacgtccaccagcgaagggatggcaattgcacaagcggtcatcgaatttgtgcat
gatacgattggctgtaaggcgctggtatctacgcacttccatgagctggcccatttggag
caaggtctgacttcgctgcgaaattattccatggccgtgcaggaaagcggcgataaggtg
aatttcctacgcaagctcataccgggtgcggctagtagtagctatggtatttattgtgcc
cgacttgcaggtttgcctaataacattattgagcgagcaaatggtctgctgtatggtttt
gaacaggcggcagctcaagtaacggcaggcaccgagacagcaagaggagcgaaggaaggg
actgatcttcgtacagtgccagggacagaagagatttctccaatgtccgcaaaatatgcg
gaccagacattgcgagcaaacggagaaactgcaccaccagtccagtctggatcacagcaa
gctaccctggtaaaagaagatactctacagattgtggaagattcaggtgagttggagcat
gcagcttctgacgtggtacagctgtccattttcggagagcaggaccttgctccctccaag
ccacactcagagacggtagaagctaatccgatcgtgcgccaaattttgcggaaggtgaaa
aatgctgatgtcatgaatatgacacccttacaggcgatgcaactgttaaatgaattaaag
aataaggccaatggtctgtaa
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