Paenibacillus polymyxa M1: PPM_2838
Help
Entry
PPM_2838 CDS
T01968
Symbol
rluD1
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppo03009
]
PPM_2838 (rluD1)
Enzymes [BR:
ppo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PPM_2838 (rluD1)
Ribosome biogenesis [BR:
ppo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPM_2838 (rluD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CCC85775
LinkDB
All DBs
Position
3300249..3301034
Genome browser
AA seq
261 aa
AA seq
DB search
MWYSRTLGGLIPLMNQDELTRQEHAQPNIPVLYEDNHVLAVVKPVNVPTQEDASGDPDLL
SLLKEDLKIRHNKPGNVFLGLVHRLDRPVGGAMIFAKTSKAASRLSESVRSRHFHKLYTA
VLNGVPAALQGRLTHYLLKDSRTNTVKTVRPGTAGAKEAILEYRVIGQAAGLSLVEIKLH
TGRSHQIRVQMQAIGCPLYGDQKYGGNLSRPGQQLALWSLLAGAPHPVSKEAMSFHSLPP
VQFPWSEWPLSLYEKMITSEN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgtggtattctcggacgctgggaggcttaattcctcttatgaatcaagatgaacttact
cggcaagagcatgcacagccgaatattcccgtactatatgaggacaaccatgtcctggcg
gttgtaaagcctgtcaatgttccgacacaggaggatgccagcggtgatcccgatctgctg
tctttactcaaggaagatttgaaaatcagacacaataagcctggtaacgtctttttaggt
ttagttcacaggctagatcggcctgtaggcggagccatgatttttgccaagacgtccaaa
gctgcttctcgcctgtcagagtcggttcgaagtcgtcattttcacaagctgtacacagct
gttctgaatggcgttcctgcggctcttcaaggccggctaacccattacctgctaaaggac
agccgtaccaacacggtcaaaacggttcgacccggcacggccggtgccaaggaagccatt
ttggaataccgcgttatcggacaggctgctggactcagtcttgtggaaattaagctacac
accggacgctcgcaccaaattcgcgtacagatgcaggcaatcggctgtcccctctatggg
gaccaaaaatatggcggtaatctgagccgtcctggtcaacagctggccctctggtccttg
ctcgctggagcaccgcatccggtcagcaaggaagcgatgagcttccactcactgcctccc
gtccaatttccttggagtgagtggcccttgtcgctttatgagaagatgattacgtcggag
aattga
DBGET
integrated database retrieval system
