Paenibacillus polymyxa M1: PPM_2852
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Entry
PPM_2852 CDS
T01968
Symbol
yknU
Name
(GenBank) lipid A export ATP-binding/permease protein msbA
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_2852 (yknU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_2852 (yknU)
Transporters [BR:
ppo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPM_2852 (yknU)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
DUF87
Zeta_toxin
AAA
AAA_23
KAP_NTPase
AAA_29
DEAD
AAA_14
AAA_19
nSTAND3
APS_kinase
FtsK_SpoIIIE
AAA_22
AAA_18
DUF6230
Motif
Other DBs
NCBI-ProteinID:
CCC85789
LinkDB
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Position
complement(3317261..3319036)
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AA seq
591 aa
AA seq
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MEVLRQLQVFFRERRHYLFLSILCLAIATALGLVYPNLLQRLIDNAIIPGDFEKVPVLAL
TVLGVVIIKGFMQFLHGFFGGRLGNYLAYRLRNACYEKLQFLSFRYYDTAKTGDLMSRLT
GDLEAIRNFIGFGFAQLLNVLLMVVFGSIMMLYINWQLTLFTMISMPLLLFVTFKFESRI
HPTFQEMRIALSALTTAVQENITGVRTVKSFARESYEVEKFSVRNEQYKSNQIQAASLWS
RFFPAMELIASVSVVLLLGMGGYLVIQKSMTLGELVAFFSLIWYIIGPIWSIGFHINNYT
QSKASGERVLELLNQSVDVTDEADALTLNADQVKGHVTFDHVTFAYGNKLPAVVDINLDA
PPGSVIGILGGTGSGKSTIIQLLMRAYNVNAGSIKLDGTDIRHLKIRDLRAQISSVFQET
FLFSSSIRNNIAYGLSHVSMDDIIRVSKLAQAHEFITELPLGYDTVVGERGLGLSGGQKQ
RIAIARALLKNPKILVLDDATSAVDMETEHEIQSGFQEVMRGRTTFIIAHRISSLRHANE
IVVLEEGRIVQRGTHEQLIATPGPYQDVYHIQYADYIAEAPDGVSEGQVRP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgctcaggcaactgcaagttttttttcgtgagaggagacattatctatttctt
tccattctatgccttgcgatagcgacggccttgggactggtgtatccgaacctgctccaa
cggctcattgataacgctatcattcccggtgacttcgagaaagttccggttctggctctg
actgtactgggagtcgtgatcatcaaagggtttatgcaatttttacatggtttttttggt
ggacggctgggtaactatctggcgtatcgacttcgcaatgcctgttacgaaaagctgcaa
tttctgtccttcagatattatgacaccgccaaaacgggggatcttatgtcccgtctgact
ggtgatttggaggcgattcgcaactttatcgggtttggttttgcgcaactcctcaatgtg
ctactgatggtcgtattcggctctatcatgatgctgtatattaattggcagctcaccctc
tttacgatgatcagcatgccattgctactcttcgtcacattcaaatttgaatctcggatt
catcccacctttcaggaaatgcgaattgctctcagcgccctgacgacagcggtacaagaa
aatattacaggtgtgcgaaccgttaaatcttttgctcgcgaatcctatgaagtggaaaaa
ttctccgtacgtaatgagcagtacaaaagtaaccaaattcaggctgcttccttatggagt
cgattttttcctgcgatggaactgattgcctcggtcagtgtggttcttctcttgggcatg
ggtggatatctagttatccagaagtcaatgaccttgggggaactcgtcgctttctttagc
ttaatttggtatattatcggtcccatctggagcattggctttcatatcaataactatacg
cagtccaaagcttccggtgaaagggttttggagttgctgaatcagtctgtagatgtaacc
gatgaagctgatgcacttacactcaacgccgatcaggtgaagggacatgtgacgtttgat
catgttacctttgcttacggaaataagctacctgctgttgttgacatcaatctggatgcg
ccaccgggatcggttattgggattttaggaggaacaggttccgggaagtcgaccattatt
caactactcatgcgagcctacaatgtgaatgcaggaagcatcaagctggatgggacggat
atacgtcatttgaaaattcgcgatttacgtgctcaaatttcttctgtgtttcaggagacg
tttctgttctcgtcctctatacgcaacaatattgcatatgggttaagtcatgtcagtatg
gatgacatcatacgtgtttccaagctggctcaggcgcatgaattcataactgaattaccg
ctgggctacgacactgttgttggtgaacgtggattgggactgtctggagggcagaaacaa
cggatcgccatcgcgcgcgcactactcaaaaatccgaaaattctcgtgctggatgatgct
accagtgcggtcgacatggagacggagcatgaaattcagtccggttttcaagaggttatg
cgtggacgcacaacgtttattatagctcatcgaatctcttcgcttcgtcatgccaatgaa
attgtagtgcttgaggaaggacgaatcgtccaacgtggaacacatgaacagctcattgct
actccaggtccatatcaagatgtgtatcatattcaatacgccgattacatagcggaggct
ccagacggtgtatccgaagggcaggtgagaccatga
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