KEGG   Paenibacillus polymyxa M1: PPM_3010
Entry
PPM_3010          CDS       T01968                                 
Symbol
lpdV
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppo  Paenibacillus polymyxa M1
Pathway
ppo00010  Glycolysis / Gluconeogenesis
ppo00020  Citrate cycle (TCA cycle)
ppo00260  Glycine, serine and threonine metabolism
ppo00280  Valine, leucine and isoleucine degradation
ppo00310  Lysine degradation
ppo00380  Tryptophan metabolism
ppo00620  Pyruvate metabolism
ppo00630  Glyoxylate and dicarboxylate metabolism
ppo00640  Propanoate metabolism
ppo00670  One carbon pool by folate
ppo00785  Lipoic acid metabolism
ppo01100  Metabolic pathways
ppo01110  Biosynthesis of secondary metabolites
ppo01120  Microbial metabolism in diverse environments
ppo01200  Carbon metabolism
ppo01210  2-Oxocarboxylic acid metabolism
ppo01240  Biosynthesis of cofactors
Module
ppo_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PPM_3010 (lpdV)
   00020 Citrate cycle (TCA cycle)
    PPM_3010 (lpdV)
   00620 Pyruvate metabolism
    PPM_3010 (lpdV)
   00630 Glyoxylate and dicarboxylate metabolism
    PPM_3010 (lpdV)
   00640 Propanoate metabolism
    PPM_3010 (lpdV)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PPM_3010 (lpdV)
   00280 Valine, leucine and isoleucine degradation
    PPM_3010 (lpdV)
   00310 Lysine degradation
    PPM_3010 (lpdV)
   00380 Tryptophan metabolism
    PPM_3010 (lpdV)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PPM_3010 (lpdV)
   00670 One carbon pool by folate
    PPM_3010 (lpdV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppo04147]
    PPM_3010 (lpdV)
Enzymes [BR:ppo01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PPM_3010 (lpdV)
Exosome [BR:ppo04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PPM_3010 (lpdV)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA Pyr_redox_3 DAO FAD_oxidored AlaDh_PNT_C FAD_binding_2 NAD_binding_8 FAD_binding_3 3HCDH_N HI0933_like Lys_Orn_oxgnase Trp_halogenase 2-Hacid_dh_C XdhC_C Lycopene_cycl Thi4 Glyco_trans_4_5
Other DBs
NCBI-ProteinID: CCC85947
LinkDB
Position
complement(3482146..3483567)
AA seq 473 aa
MTIHCDVAILGGGTGGYVAAIRAAQLGKEVVIIEKDKLGGTCLHRGCIPSKALLRSAEVY
ATIKESAQYGIETSGAQLVFPKVQERKEAVVEQLHQGVQFLMRKNKITVLSGKGRVIGPS
IFSPKSGAVAVELEDGEMETIVPAHLIIATGSRPRVLPGLEPDGEFILSSDEALTMENLP
ASLIIVGGGVIGVEWASMLNDFGVEVTVVEAANRLIPTEDEDVSREMQRLLTKRGVKVLT
GAQVLAETYGKDEEGVQIDVQKGEETETLSVSKLLISVGRQANVENIGLENTDIRVERGF
ISVNEHLQTNEPHIYAIGDCIGGLQLAHAASHEGLQAVHHLAGEEFHSVPNYMIPRCIYT
RPEAASVGLTEQEARERGHQVKTGKFPFQAIGKSLVYGSRDGFVKVVADQQTNDILGVHM
IGTHVTDLISEAALAQLLDATPWEVGQLIHPHPTLSEILGEAMLAVDGQAIGI
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgactatacattgtgatgtcgctattttgggtggaggaaccggagggtatgtagcagca
attcgcgcagcccaactcggcaaggaagtggtgatcatcgaaaaggacaagctcggcgga
acctgtctgcaccgtggttgtattccgagcaaggctttgctgcgcagtgcggaagtatat
gcaacgattaaagaaagtgcgcaatatggtattgagacatcgggagcacagcttgtattt
cccaaggttcaggaacgtaaggaagccgttgtggagcagctacaccagggcgttcaattt
ttgatgcggaaaaataaaattacggtgctgagcggtaagggacgcgtgattggaccgtct
atattttctcctaaaagcggtgcagtggctgtggaactagaagatggtgagatggagacg
attgttccggcacacctcattattgcaacaggatcacgtccgcgtgtgctgcctggactg
gagccagatggcgaatttattctgagcagtgacgaagcattgactatggagaacctgcca
gcatccctgattatcgtgggtggtggggtcattggcgtggaatgggcttccatgctaaat
gattttggcgtggaggttacggtggttgaggccgcgaatcgacttattcctacggaggac
gaggacgtttcgcgtgaaatgcagcgcttgttaaccaagcgtggtgtcaaggtgctgacg
ggggcacaagtgttggctgaaacctacggcaaggatgaggaaggcgtacagattgacgtg
caaaaaggtgaagaaaccgaaaccctcagtgtttccaaactgctcatttctgtaggtcgt
caggcgaatgtggaaaatatcgggctggaaaatacggatatccgcgtggagcgtggcttt
atctcggttaatgagcatttgcagacaaatgagccacatatctacgccatcggggattgc
atcggcggcttacaactggcccatgccgcgagtcatgaaggcttgcaggcagttcatcat
ttggcgggcgaagagtttcacagcgtacccaactatatgattccgcggtgtatttacaca
cgtcctgaagccgcaagcgtcggcttgacggagcaggaagcccgtgaacgtggacaccag
gtgaaaacagggaagttccctttccaagctatcggaaaatcgctagtatacggtagtcga
gacggcttcgtgaaagtggtggcggaccagcaaaccaatgatattcttggtgtacatatg
atcggtacgcatgtaacggatctgatcagcgaggccgctcttgcgcaattgctggatgct
acgccgtgggaagtcggacagcttattcatccgcatccaacgttgtcggagattttggga
gaagcgatgctggcagttgatggacaagcgataggcatataa

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