Paenibacillus polymyxa M1: PPM_3010
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Entry
PPM_3010 CDS
T01968
Symbol
lpdV
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00010
Glycolysis / Gluconeogenesis
ppo00020
Citrate cycle (TCA cycle)
ppo00260
Glycine, serine and threonine metabolism
ppo00280
Valine, leucine and isoleucine degradation
ppo00310
Lysine degradation
ppo00380
Tryptophan metabolism
ppo00620
Pyruvate metabolism
ppo00630
Glyoxylate and dicarboxylate metabolism
ppo00640
Propanoate metabolism
ppo00670
One carbon pool by folate
ppo00785
Lipoic acid metabolism
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01120
Microbial metabolism in diverse environments
ppo01200
Carbon metabolism
ppo01210
2-Oxocarboxylic acid metabolism
ppo01240
Biosynthesis of cofactors
Module
ppo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppo_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ppo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PPM_3010 (lpdV)
00020 Citrate cycle (TCA cycle)
PPM_3010 (lpdV)
00620 Pyruvate metabolism
PPM_3010 (lpdV)
00630 Glyoxylate and dicarboxylate metabolism
PPM_3010 (lpdV)
00640 Propanoate metabolism
PPM_3010 (lpdV)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPM_3010 (lpdV)
00280 Valine, leucine and isoleucine degradation
PPM_3010 (lpdV)
00310 Lysine degradation
PPM_3010 (lpdV)
00380 Tryptophan metabolism
PPM_3010 (lpdV)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PPM_3010 (lpdV)
00670 One carbon pool by folate
PPM_3010 (lpdV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppo04147
]
PPM_3010 (lpdV)
Enzymes [BR:
ppo01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PPM_3010 (lpdV)
Exosome [BR:
ppo04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PPM_3010 (lpdV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
Pyr_redox_3
DAO
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
NAD_binding_8
FAD_binding_3
3HCDH_N
HI0933_like
Lys_Orn_oxgnase
Trp_halogenase
2-Hacid_dh_C
XdhC_C
Lycopene_cycl
Thi4
Glyco_trans_4_5
Motif
Other DBs
NCBI-ProteinID:
CCC85947
LinkDB
All DBs
Position
complement(3482146..3483567)
Genome browser
AA seq
473 aa
AA seq
DB search
MTIHCDVAILGGGTGGYVAAIRAAQLGKEVVIIEKDKLGGTCLHRGCIPSKALLRSAEVY
ATIKESAQYGIETSGAQLVFPKVQERKEAVVEQLHQGVQFLMRKNKITVLSGKGRVIGPS
IFSPKSGAVAVELEDGEMETIVPAHLIIATGSRPRVLPGLEPDGEFILSSDEALTMENLP
ASLIIVGGGVIGVEWASMLNDFGVEVTVVEAANRLIPTEDEDVSREMQRLLTKRGVKVLT
GAQVLAETYGKDEEGVQIDVQKGEETETLSVSKLLISVGRQANVENIGLENTDIRVERGF
ISVNEHLQTNEPHIYAIGDCIGGLQLAHAASHEGLQAVHHLAGEEFHSVPNYMIPRCIYT
RPEAASVGLTEQEARERGHQVKTGKFPFQAIGKSLVYGSRDGFVKVVADQQTNDILGVHM
IGTHVTDLISEAALAQLLDATPWEVGQLIHPHPTLSEILGEAMLAVDGQAIGI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgactatacattgtgatgtcgctattttgggtggaggaaccggagggtatgtagcagca
attcgcgcagcccaactcggcaaggaagtggtgatcatcgaaaaggacaagctcggcgga
acctgtctgcaccgtggttgtattccgagcaaggctttgctgcgcagtgcggaagtatat
gcaacgattaaagaaagtgcgcaatatggtattgagacatcgggagcacagcttgtattt
cccaaggttcaggaacgtaaggaagccgttgtggagcagctacaccagggcgttcaattt
ttgatgcggaaaaataaaattacggtgctgagcggtaagggacgcgtgattggaccgtct
atattttctcctaaaagcggtgcagtggctgtggaactagaagatggtgagatggagacg
attgttccggcacacctcattattgcaacaggatcacgtccgcgtgtgctgcctggactg
gagccagatggcgaatttattctgagcagtgacgaagcattgactatggagaacctgcca
gcatccctgattatcgtgggtggtggggtcattggcgtggaatgggcttccatgctaaat
gattttggcgtggaggttacggtggttgaggccgcgaatcgacttattcctacggaggac
gaggacgtttcgcgtgaaatgcagcgcttgttaaccaagcgtggtgtcaaggtgctgacg
ggggcacaagtgttggctgaaacctacggcaaggatgaggaaggcgtacagattgacgtg
caaaaaggtgaagaaaccgaaaccctcagtgtttccaaactgctcatttctgtaggtcgt
caggcgaatgtggaaaatatcgggctggaaaatacggatatccgcgtggagcgtggcttt
atctcggttaatgagcatttgcagacaaatgagccacatatctacgccatcggggattgc
atcggcggcttacaactggcccatgccgcgagtcatgaaggcttgcaggcagttcatcat
ttggcgggcgaagagtttcacagcgtacccaactatatgattccgcggtgtatttacaca
cgtcctgaagccgcaagcgtcggcttgacggagcaggaagcccgtgaacgtggacaccag
gtgaaaacagggaagttccctttccaagctatcggaaaatcgctagtatacggtagtcga
gacggcttcgtgaaagtggtggcggaccagcaaaccaatgatattcttggtgtacatatg
atcggtacgcatgtaacggatctgatcagcgaggccgctcttgcgcaattgctggatgct
acgccgtgggaagtcggacagcttattcatccgcatccaacgttgtcggagattttggga
gaagcgatgctggcagttgatggacaagcgataggcatataa
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