Paenibacillus polymyxa M1: PPM_3187
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Entry
PPM_3187 CDS
T01968
Symbol
nasD1
Name
(GenBank) bFD-like (2Fe-2S)-binding region
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00910
Nitrogen metabolism
ppo01100
Metabolic pathways
ppo01120
Microbial metabolism in diverse environments
ppo01310
Nitrogen cycle
Module
ppo_M00531
Assimilatory nitrate reduction, nitrate => ammonia
ppo_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PPM_3187 (nasD1)
Enzymes [BR:
ppo01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
PPM_3187 (nasD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
DAO
NAD_binding_7
FAD_binding_2
NAD_binding_9
AlaDh_PNT_C
3HCDH_N
GIDA
CheB_methylest
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
CCC86124
LinkDB
All DBs
Position
complement(3668423..3670855)
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AA seq
810 aa
AA seq
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MNYIQKLVLVGNGMAGIRTLEHLLKIAPGAYEITVFGAEPHPNYNRIMLSSVLAGGAGLQ
DIIINDWSWYEENNIRLYTDDPVTAIDTENRQVTSRSGVCVSYDLLLLATGSKAFILPLP
GADKDGVIGFRDIRDCETMIETAKTHKKAAVIGGGLLGLEAARGLLNLGMDVTVIHLNGY
IMDRQLDEAASLMLRRELEEQGMTFLVNKRTAAITGRRRVEGLKFADGSELEADLIVMAV
GIKPDIELAVSAGIPVNRGIIVNDNMETNIPGIYAVGECAEHRGITYGLVAPLYEQGGVL
AQRLAGMETPGYSGSVTSTRLKVSGVDVFSAGNYKDEPETRSLRYQDDIGGVYKKIVIKE
EKLTGAVLFGDTSDGAMLFSLIKSGDSVVGREKELLLGFNPGQPEGSGTMMLEQMPEDEI
VCGCNGVSKGDIGEAVAAGCRSLGEIKACTKASASCGGCKPIVEGLLQLYAGAETGEPIK
EGICRCTTLDREAIIDGIREMGLKSVKEVMNVLGWNEPEGCTKCRPALNYYLGLLWPLDY
EDEKESRFTNERYHANIQKDGTYSVVPRIYGGVTSPADLKKIAAVAEKYNVPLVKFTGGQ
RLDLLGVKKEDLPGIWSELDMPSGYAYGKTLRTVKTCVGNTFCRFGTQDAMGMGIRLEKA
FERLNAPSKVKLAVSGCPRNCAEATIKDLGVVAIDGGWGIYIGGNGGIKVRAAELLCTVK
TEDEVMEWTGAYLQYYREQANWNERTAHWVERVGVDSIKQVLANAEMRQQLVSRIEETLS
TTTDPWHEIIHNEELRKNFVQLPELKAVME
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatccaaaaattagtgctggtcggcaacggaatggcggggatacgcactctc
gaacatttgctgaagatcgcaccaggtgcttatgagattacggtatttggggccgagccc
catcccaactataatcggatcatgctgtcctctgttctggctggaggagcaggtttgcag
gatattatcatcaacgattggagttggtatgaagagaataatatccgattgtataccgat
gatcctgtcacagctatcgatacggaaaatcggcaggtgacttcacgatccggtgtatgc
gtctcttatgatttactgttgttggcaacaggttctaaagctttcatcctgccgcttcca
ggagccgacaaggatggtgtgattggtttccgggatatccgtgactgcgagacgatgata
gagactgcgaagacgcacaaaaaagcagccgttatcggcggcggattgcttgggctagag
gcagccagggggctgcttaatttggggatggacgttacagttattcatctcaatggatat
attatggaccgacagctggatgaggcagcttcccttatgttacggcgcgagctggaggaa
cagggaatgacttttctggtcaataagcggacggcggctatcaccgggcgtcgtcgcgtg
gaagggctgaagtttgctgatggaagcgaactggaagcggatttgatcgttatggcggta
ggtatcaaaccagatattgaactggcggtttcggcgggaattcccgtaaaccgtggcatc
atcgtaaatgataacatggaaacgaacattcctggcatatacgccgttggagaatgtgca
gaacaccggggaatcacttacggtctggttgccccattatatgagcaggggggtgtcctt
gctcagcgactcgcgggaatggagactcccggctacagtggttccgttacttcgacaagg
ttgaaggtatcgggcgtcgatgtgttttcagcaggcaattacaaggatgagccagaaacg
cgatctctgcggtatcaggatgatattggtggcgtctacaaaaaaatcgtcatcaaggaa
gaaaaactgaccggagccgtcctgtttggggatacatctgatggagccatgttgttttct
ttgatcaaaagtggtgattcggtggttggtcgagagaaagagttgttacttggttttaac
cctggccaaccagaaggtagtggcaccatgatgctggagcagatgcctgaggatgaaatt
gtatgcggatgtaatggtgtatccaagggtgacattggagaggcggttgcggcaggctgc
aggagtcttggggagattaaggcctgtacgaaggcatcggcatcatgcggcggctgtaag
ccaatagtggaggggctcttacagctgtacgcaggtgcagaaaccggagaaccgattaaa
gaagggatatgtcgttgtacaacgcttgatcgggaagcgattattgatggtatccgggaa
atggggctgaagagcgtcaaagaagtgatgaacgtgctgggctggaacgaacctgaaggg
tgtaccaaatgtcggccggccctcaactattatctaggtctgctgtggccactggattat
gaggatgagaaggaatccagattcacgaatgaaaggtaccatgccaatatccagaaggat
ggtacctactctgtggtgccccgaatttatggaggagttacttcacctgccgacctgaag
aagattgccgctgtcgcggagaaatacaacgtgcctttggttaaatttacgggtggccaa
cgtctcgacttgcttggtgtgaaaaaggaagatctaccgggaatctggtctgaattggat
atgccgtcagggtatgcatatggaaagacattgcgaacggtcaagacgtgcgttggaaac
accttttgtcgctttggcacacaggatgctatgggtatgggcatccggttggaaaaggca
ttcgagcgtctgaatgcaccatccaaagtcaaactggctgtgtcgggctgtccgcgtaac
tgcgcagaagcgacgattaaggatttgggcgttgtcgctattgatggtggctgggggatc
tacattggaggtaatggcggtattaaggtgcgggcagcagaactgctgtgtactgtaaaa
accgaggatgaagtgatggaatggactggtgcctatttacagtattaccgtgagcaggcg
aattggaacgagcgaacagctcattgggtagaacgggtaggcgtagactcgatcaaacag
gtactagcaaatgcggagatgaggcagcaactggtaagcagaattgaggagacgttaagc
acaacgacggatccgtggcacgaaatcattcataacgaagagctgcgcaaaaattttgtg
cagctgccagagcttaaggcagtaatggaatag
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