Paenibacillus polymyxa M1: PPM_3211
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Entry
PPM_3211 CDS
T01968
Symbol
aspS1
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPM_3211 (aspS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppo01007
]
PPM_3211 (aspS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_3211 (aspS1)
03029 Mitochondrial biogenesis [BR:
ppo03029
]
PPM_3211 (aspS1)
Enzymes [BR:
ppo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PPM_3211 (aspS1)
Amino acid related enzymes [BR:
ppo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PPM_3211 (aspS1)
Transfer RNA biogenesis [BR:
ppo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PPM_3211 (aspS1)
Prokaryotic type
Other AARSs
PPM_3211 (aspS1)
Mitochondrial biogenesis [BR:
ppo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPM_3211 (aspS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
CCC86148
LinkDB
All DBs
Position
complement(3701000..3702769)
Genome browser
AA seq
589 aa
AA seq
DB search
MHRYRTHNCGELDQTHVGEIVRIAGWIKNIRNLGGIVFIDLRDHYGVTQIVVSDSNELKD
FVSKISRESTISVIGAVCHRSESTISPHMKTGYIEVVAKEIEVLGKVINPLPFEVSSAHE
AREDLRLKYRFLDLRNENLHDNIVLRSRVIQSIRKKMIDLDFLEIQTPILTSSSPEGARD
YLVPSRVHPGQFYALPQAPQQFKQLLMVSGFDKYFQIAPCFRDEDARADRSPGEFYQLDL
EMAFATQEDVFNVVENMLYEVFSEFTNYKISKPFSRIPYQEAMLKYGSDKPDLRNPLIIH
DVTELFTETDFKVFKNKTIRVIATPGCGGQPRSFYDDIVNFAMEAGAKGLSWIKFNDDMS
LSGSIAKFIPEKVKNELMNVTQAGPGYALFFAADELKNVEKIAGAVRSQLGKRLDLLEKD
TFKFCWIVDFPMFELDPDTHKIEFSHNPFSMPQGGMDALLNMNPLDILAYQYDIVCNGIE
LSSGAVRNHDTEIMVKAFEIAGYTYEEIKSRFPALFNAFQFGPPPHAGIAPGIDRIVMIL
ANESNIREVIAFPMNSKAQDVLMGAPSEVTDKQLRDVNIKLANAQPQTE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgcataggtatagaactcataactgtggagaactggatcaaacgcatgtcggagaaatc
gtgagaattgcaggttggattaaaaatattcgtaaccttggcgggattgtttttattgac
cttagggaccattatggggttacgcaaatcgttgtctctgattctaatgaattaaaggat
tttgtatccaagatcagcagggaatcaaccatctctgtcataggagctgtatgtcacaga
tccgaaagtacgatcagtccccatatgaaaaccggatatattgaggtcgttgccaaggag
atagaagtgttaggaaaggtcataaatccattgccttttgaagtatcttcagcacatgaa
gctcgggaagatttaagattaaagtatcgttttctggatctgcgcaatgaaaatctgcat
gataatattgtacttcgctctagagtaattcaaagtatccgaaaaaagatgattgatttg
gattttttagagattcagacaccgattctgacaagttcatctccagagggcgccagagac
tatttggttcctagtagagtgcatccaggtcaattttatgccttgcctcaggcacctcag
caatttaaacaactattaatggtctccggctttgataaatattttcaaattgcaccgtgc
tttagagatgaagatgcaagggcagacagatcgcctggcgagttttatcagctggatttg
gaaatggcatttgctacacaggaagatgtttttaatgtagttgaaaatatgctgtatgaa
gttttttccgaatttacaaattataaaatttcaaagccttttagtagaattccctatcaa
gaagccatgctcaaatacgggagcgataaacctgacttaagaaatccattaattatccat
gatgttacagagctttttacagagactgattttaaagtgtttaaaaataaaacgataaga
gttattgcaactcctggttgtggagggcagccaagaagcttttacgatgatatagtgaac
tttgctatggaggctggagcgaagggcctttcatggattaagttcaatgatgatatgtct
ctcagcggctcaattgcaaaatttattccggagaaggtaaaaaacgaattaatgaatgta
acgcaagctggtccgggatatgcactgttttttgctgccgatgagcttaaaaatgtcgaa
aaaatagctggtgctgtccgaagtcaattaggcaaaaggctggatttattagaaaaggat
acgtttaagttttgctggattgttgatttccccatgtttgaattggatcctgatacccat
aaaatagagttcagtcataacccgttttcgatgccgcaaggtggtatggatgcgctgctg
aatatgaatcctctggatatcctggcgtaccaatatgatattgtatgtaatgggattgag
ctgtcctcgggtgctgtccgtaaccacgatacagagattatggtaaaagcctttgagatc
gcgggttatacatatgaagagatcaagagtagatttcctgcactctttaatgcttttcaa
tttgggccaccccctcacgccggtatagcacctggaattgataggattgtgatgatcctt
gcaaatgaatcgaatattcgagaggttattgcttttccgatgaatagcaaagcacaggac
gtattaatgggagctccttcggaggttactgacaaacaattgagagatgttaatatcaaa
ttggcaaatgctcagccacaaacagaataa
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