Paenibacillus polymyxa M1: PPM_3361
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Entry
PPM_3361 CDS
T01968
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00550
Peptidoglycan biosynthesis
ppo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPM_3361 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppo01011
]
PPM_3361 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PPM_3361 (spoVD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
CCI70170
LinkDB
All DBs
Position
complement(3895609..3897525)
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AA seq
638 aa
AA seq
DB search
MKKSNVIMRRRLVWGLLGLFVLFAALSIRLAYVQLGKGGELSAKAEDSWRRNIPFAAKRG
EILDRQGTALTYNVSSPTVMAIPVQIKEPEETARRLAPLLDMSEDKVLKLITKRTASQKL
QPGGRKITMEKAQKIRDLKLPGIVVAEDNKRYYPYGDLAAHILGFTGIDNQGLTGVEKQQ
NSKLRGIDGSIAYLSDAGGRLMPGSSEKYIEPKDGLNLQLTIDKSVQSIMERELDQAMVK
FQAKSALSIAMNPKTGEILGMAGRPSYEPALYKQYAPEIYNRNLPIWMTYEPGSTFKIIT
LAAALEEKKVNLKNDRFFDPGYIEVGGARLRCWKKGGHGSQTFLQVVENSCNPGFVTLGQ
RLGKETLFKYIRNFGFGSKTGIDMIGEGNGILFKLAQVGPVELATTAFGQGVSVTPIQQV
TAVSAAINGGNLYKPHITKGWIQPETGKVLEKVEPELVRRVVSEDTSRQVREALESVVAK
GTGRPAFIEGYRVGGKTGTAQKVINGRYSSSEHIVSFIGFAPADDPQIVVYTAVDNPKGI
QFGGVVAAPIVQNILKDALIALKIPPRTNQIAKEYKYGEKPIETVPDLVGATAADLYEDM
NMNFMLVKSGSGKTVISQAPKPGSRLERGSTIRIYMGD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagtctaacgtgatcatgcggcgtaggctggtatgggggctactgggattgttc
gtactgtttgcggccttgtcgatccggctcgcctatgttcaattgggtaaaggaggcgag
ctctcagccaaggctgaggattcgtggcgccgcaatattccttttgccgccaagcgtggc
gaaattttggatcggcagggtactgcgctgacctataatgtcagttcaccgactgtcatg
gcgataccagtacagattaaggagccggaagaaacggcacgcaggctggcgcccttgcta
gatatgagtgaggataaagtactcaagctgattaccaaacgaacagcaagccaaaaactt
cagcccggcggacgaaaaattacgatggagaaagcccagaaaattcgtgatttgaagctg
ccgggtatcgttgttgctgaagacaacaaacgttattatccttatggtgatctagcggct
catattcttggatttaccggaattgataatcaagggctgacaggtgtagagaagcagcaa
aacagcaagcttcgaggaatcgatggaagcatcgcgtatttatcagacgcaggtggccgc
ctgatgcctggttcttctgaaaagtatattgaaccgaaggatggactgaatttacaatta
accattgataaatcggtgcaatccattatggaacgggagcttgaccaagccatggtcaaa
tttcaggcgaagtccgcgctgtctattgcgatgaaccccaagacgggtgaaatattaggc
atggctggacgaccaagctatgagccagcgctttacaagcaatatgcgcctgaaatttat
aatcgaaatctgccaatttggatgacatatgaacctggttctacttttaaaattattaca
ctggccgctgccttggaagaaaagaaggttaatcttaaaaatgaccgtttctttgatccg
ggatatattgaagtcggtggagcacgcctgcgttgttggaaaaaaggtgggcatggcagc
cagacctttcttcaagtggtagaaaattcatgcaatcccggttttgtaacgttgggacaa
cgtctgggcaaagaaacactgttcaagtacattcgcaatttcggcttcggcagcaaaaca
ggaattgacatgatcggtgagggcaatggcattttgttcaagctagctcaggtcggacct
gtagagctggctactacggcctttggtcaaggggtatctgtcactccgattcagcaggtt
acggctgtgtcggcagcaatcaatggtggcaatctttataagcctcacatcacaaaaggc
tggattcagcccgaaaccggaaaggttctagaaaaagtggagccggaactggtgcgtaga
gttgtttcagaggatacctctcgacaggtaagggaagcgctggaaagtgttgtagctaaa
ggtacaggtcgtcctgcctttattgagggttaccgggttggaggtaaaacgggtacagca
caaaaggtgattaacggacgttattcttcctcggagcatattgtatcctttattggtttt
gctccggcggatgatccgcaaatcgtcgtctatactgctgtcgataacccgaaagggatt
caattcggcggtgtggttgctgcgccaatcgtgcaaaatattttaaaggatgcactgatt
gccttgaaaataccacctcgtaccaatcaaattgccaaagagtacaagtatggggaaaaa
ccgatcgaaacggtacctgatctggtaggtgccactgcagctgatttatacgaagatatg
aatatgaactttatgctcgtgaaatctgggtcaggcaagacggtcataagtcaggcaccg
aagccaggctctcgattggaacgaggatcaacgatccgtatatatatgggggattga
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