Paenibacillus polymyxa M1: PPM_3419
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Entry
PPM_3419 CDS
T01968
Symbol
yccW
Name
(GenBank) UPF0064 protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppo03009
]
PPM_3419 (yccW)
Enzymes [BR:
ppo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PPM_3419 (yccW)
Ribosome biogenesis [BR:
ppo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPM_3419 (yccW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
MTS
TRM
Methyltransf_11
Methyltransf_12
PUA
Methyltransf_15
Ubie_methyltran
Methyltransf_18
Methyltransf_24
UPF0113
UPF0020
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
CCI70228
LinkDB
All DBs
Position
complement(3971845..3973224)
Genome browser
AA seq
459 aa
AA seq
DB search
MPSVILERSRKKRLEQAHPWVFKNEIAKIEGDPEAGDLVNILNHQGRYLATGYYNPASQI
TVRVMSYEPLEVMDQSFFAQRFRNCLEHRERFVTGGNAYRLVYGEADFLPGLIVDRFGDV
LVVQLLTLGMDRRREEIRDALVEVMGPVGIYERSDVSIRELEGLEQTKGPLYGDCPRHVV
VTENGLQIKVDIEEGQKTGYFFDQRENRAAIAPLMTGWGARSGITLQEVAATPGDDATTV
MKPVNKSGKVVEFPFWDGATVLECFSHTGSFTLNACKHGAKKVTCLDISEHAIESARDNV
KLNGFEDRVEFVVDDAFQYLRNQVKGVEERTARAGGKGDTSKPLTAGGGRTFDVVILDPP
AFAKTKSAVKGATRGYKDINLHGMKLVNEGGYLVTASCSFHMRPELFLDTIKEAATDAGK
TLRLVDWRAAGKDHPQILGVEEGHYLKFAIFEVRSRTRL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgccttcagtaatattagaacgtagccgcaaaaaaaggctggagcaagcacacccttgg
gtgtttaaaaatgaaatagccaagattgagggtgatccagaagcaggtgatttggtcaac
atccttaaccatcaaggtcgttatttggcgacaggttactataatcctgcttcgcaaatt
acagtgcgtgtgatgtcctatgagccgctggaagtgatggaccaaagcttctttgcccaa
cgtttccgtaattgtttggagcatcgcgaacgctttgtgactggggggaacgcttatcgc
ttggtgtacggcgaggctgattttttgcctgggctgattgtagaccgttttggtgatgta
ttggtcgttcagctgttaacgcttggcatggatcggcgcagggaagaaatcagagatgcg
cttgttgaagtcatggggccagttggtatatatgagcgtagtgatgtatccatccgcgag
ctggaagggttggaacagacgaaaggtcctttgtacggcgattgcccgcgccatgtggtg
gtgacggaaaatggcttacaaatcaaggtcgatatcgaagagggccaaaagactggctat
ttctttgaccagcgtgaaaatcgcgcggctatcgcgccgttgatgacaggttggggagcg
cgtagcggaattacgttacaagaagtagctgcaaccccaggcgatgacgccacaacggtc
atgaagcctgtgaataaaagtggtaaggtggttgaattcccattctgggacggcgcaact
gtattggaatgtttttcacatacaggtagctttacgctcaatgcgtgtaaacatggtgcg
aaaaaagtaacttgtctggatatttctgaacatgcgattgaaagtgctcgggataacgtg
aagctgaacggttttgaggatcgcgtcgagtttgtcgtcgacgatgcttttcaatattta
cgtaatcaggtgaaaggtgtagaggaacgcaccgcgcgagcggggggcaaaggagataca
tccaagccgctgactgcgggtggcggacgcacctttgacgtagttattctggatccgcca
gcttttgccaaaacgaagagtgctgtcaaaggagctacacgtggatataaagatatcaac
cttcatgggatgaagcttgtcaatgagggcggttatttggtaacggcgagttgttcgttc
catatgcggccagagctgtttttggacacgattaaggaagcggcgacagatgccggtaaa
accctccgactggtagattggagagcggcagggaaggaccatcctcaaattttaggtgtg
gaggaaggtcattatttgaaatttgccatctttgaagtgcgcagccggacacggctgtag
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