Paenibacillus polymyxa M1: PPM_3444
Help
Entry
PPM_3444 CDS
T01968
Symbol
yqeN
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03030
DNA replication
ppo03430
Mismatch repair
ppo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPM_3444 (yqeN)
03430 Mismatch repair
PPM_3444 (yqeN)
03440 Homologous recombination
PPM_3444 (yqeN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppo03032
]
PPM_3444 (yqeN)
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_3444 (yqeN)
Enzymes [BR:
ppo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPM_3444 (yqeN)
DNA replication proteins [BR:
ppo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPM_3444 (yqeN)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPM_3444 (yqeN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
TcaA_5th
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CCI70253
LinkDB
All DBs
Position
complement(3998951..3999982)
Genome browser
AA seq
343 aa
AA seq
DB search
MDVKTASRAIRKGDISPVYLLYGSEKYQMKQFVDMLKEKVVEEEHRDFAIISYDLTETPI
EVVVEDAETAPFLVPKKLIIVRDTSVFAAGKDNGKIEHRLETLLTYMDNPTDYSVIVFTV
QAEKLDERKKIVKKLKSDASVIAFAPMGGDDLVAWVHKRAAEREVQLAAGAAERLIQYTG
TGLQSLAAEIDKLCLYAGAQGTISSADIESLVPRNTEQNVFAMVEDLANLRLDKALSIFY
ELLKQKEEPIKIAALITRQFRIMLQVKELAGQSYSRQQIASQLSLHPYGVKVAGDQARRF
RPEQLRQLLYELGELDYHMKTGVVDKVLGLELFLMKMGAGASI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaaacagcctctagggctattcgcaaaggtgatatttcgccagtgtatctg
ctatatggcagtgaaaaatatcaaatgaagcagtttgttgatatgctaaaagagaaggtg
gtggaggaggagcatcgtgacttcgccattatttcttatgatttaaccgagacgccaatt
gaggtggttgtggaggatgcggagacagcgccttttctggtgccgaaaaagctaattatt
gtacgggataccagtgtatttgcagcaggcaaagataatggcaaaatagagcaccgtctt
gagactctgttgacttatatggataacccgactgactatagcgtcatcgtttttacggtt
caggctgaaaagctggacgaacggaaaaagatcgtcaagaaactgaaaagtgatgcctca
gttattgctttcgcccctatgggtggagatgatcttgtagcttgggtccataagcgtgca
gcagaaagagaagtgcagttggcagcaggagcggctgagagactcattcaatacacgggt
accgggcttcaatccttggctgccgagatagataagctgtgcttatacgcaggagcgcag
ggaacaatctcatccgctgacattgaatcccttgtgcctcgtaatacagagcaaaacgta
tttgcgatggttgaggatctggctaatttgcggctggataaggcgctcagtattttttat
gaattgcttaagcaaaaagaggaaccaatcaagattgcagctttgatcacacggcagttt
cgtattatgttgcaggtcaaagagctggcaggtcaaagctattctcggcaacaaattgcg
agtcagctcagcttgcatccttatggggtgaaagttgcaggggatcaagcgcgacgcttc
cgtcctgagcagctgcgccagcttctctatgaactgggcgagctggactatcatatgaaa
acaggtgttgttgacaaggtgctgggactcgaactatttttgatgaaaatgggagcaggt
gcttcaatctaa
DBGET
integrated database retrieval system
