Paenibacillus polymyxa M1: PPM_3448
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Entry
PPM_3448 CDS
T01968
Symbol
comEB
Name
(GenBank) Deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00240
Pyrimidine metabolism
ppo01100
Metabolic pathways
ppo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PPM_3448 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppo02044
]
PPM_3448 (comEB)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PPM_3448 (comEB)
Secretion system [BR:
ppo02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PPM_3448 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
APOBEC_N
SNAD4
Motif
Other DBs
NCBI-ProteinID:
CCI70257
LinkDB
All DBs
Position
complement(4005423..4005941)
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AA seq
172 aa
AA seq
DB search
MSADVRKDWDTYFMDIAYMVSTRSRCARRHVGAVLVQGKKLLGTAYNGAPSGVPDCSEAG
CMISEEYEVVHRDGREEMVKKQRCIRTIHAEQNLLLFTDRIDREGSSVYVTDQPCWTCAN
MLANSGIVEIVYHRPYPKDADKVRAMMEEKGIAFRMLETYHPPQETLMDVKD
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatgtacgcaaggactgggacacctacttcatggatatcgcttatatggta
tccacccgttcgcgctgcgcgcggcgtcatgttggagccgtacttgtacaaggtaagaag
ctattggggacggcctataatggcgcaccatccggggtgcctgactgttctgaggcaggc
tgtatgatctcggaggaatatgaggtcgttcaccgtgatggacgggaggaaatggttaag
aagcagcgttgtattcgcactattcatgcggagcagaacctgttgctgtttactgaccgg
attgaccgtgaaggctcctccgtatatgtcaccgaccagccgtgctggacatgtgccaat
atgttggcgaacagcggtattgtggagattgtatatcaccgaccttatccaaaagatgcc
gacaaggttcgtgctatgatggaggaaaagggaatcgcctttcgtatgctggagacatat
catccaccacaggaaacgctgatggatgttaaagattaa
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