Paenibacillus polymyxa M1: PPM_3506
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Entry
PPM_3506 CDS
T01968
Symbol
yjgC
Name
(GenBank) formate dehydrogenase alpha chain
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00630
Glyoxylate and dicarboxylate metabolism
ppo00680
Methane metabolism
ppo01100
Metabolic pathways
ppo01120
Microbial metabolism in diverse environments
ppo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPM_3506 (yjgC)
09102 Energy metabolism
00680 Methane metabolism
PPM_3506 (yjgC)
Enzymes [BR:
ppo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
PPM_3506 (yjgC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_7
Fer4_2
Fer4_8
Fer4_9
Fer4_10
Fer4_21
Fer2
Fer4_18
Fer4_15
Fer4_NDSU1
Fer4_16
Fer4_4
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
CCI70315
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All DBs
Position
4064667..4067609
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AA seq
980 aa
AA seq
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MTDSTIKITLNGQELKTNSSATILEVINENNIAHPQLCYVPEVDPIRTCDTCIVEVDGKL
VRSCSTLATNGMNIHLHSDRAKAAQTEAMDRLLENHLLYCTVCDNNNGNCKLHNTAELME
IEHQKYPYRPKVDPTEVDMSHPFYRYDPNQCIACGQCVEVCQNLQVNETLSLDWEAERPR
VIWDEGVAINDSSCVSCGQCVTVCPCNALMEKSMLGEAGFMSGINKDLLNPMVDLIKEVE
PGYSGIFAISEAEAAMRETRTKKTKTVCTFCGVGCSFEVWTKGRKILKVQPTSEGPVNGI
STCVKGKFGWDFVNSDQRLTSPLIRQGDEFVEATWEEALSLMASKMGAIKETYGGEALGF
ISSSKFTIEENYLMQKLARQVFQTNNVDNCSRYCQSPASWGLQYTGGIGGDSGTIKDIAS
AGLVILVGCAPGEGHPVLATRIKRAHKLHGQKLISVDLRKHEMAERADLFMRPKQGTDYV
WLSAVAKYIIEQNWHDAKFIEEHVNFYPEYLKLLENFTLEFAEQETGISKETLIQVATMI
HEADGTAICWGMGVTQNIAGSYTSIAIANLLLVTGNFMRPGAGAYPLRGHNNVQGAADMG
TMPDIFPGYQPVTNDAIRSKFEAAYGVQIPSQRGLDNIQMLEAIETGKLKGMYIAGEEMA
WVDADSNHTQEMLANLDFLVVQDVFLSKTAEFADVILPAVPSLEKDGTFTNTERRVQRLY
EALRPVGDSKPDWWIFSQFAKHMGFDWDYSHPSEIFEEMAALTPFFSQCNYDVLEGWNSF
HWGSPDGSNTPLLHTNGFNFPDKKARLGLFEYVPPKEYPAEFDLTLNNGRLLEQFHEGNM
TTKSTGLQLKLPKVFVEVSPELAEERGVTDGSLVRLESPYGAVKLRVLVTDRVQGTEIYV
PMHSTSHEGAVNLLTGGAFDVITRTPAYKQTKVRMQILEIDGQNPLPRINPRYKKRHPQN
GVEVNRKWNRPGYVDLVDQK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
gtgacggatagtacgatcaaaattacattaaacggacaggaactgaaaacgaatagcagt
gcaaccattcttgaagtaatcaacgaaaacaatattgcccatccccaactgtgttacgtt
cccgaagtggatccgatccgcacctgtgacacatgtatcgtggaagtagacggaaagctt
gtacgctcctgttcaacacttgctacgaatggaatgaatattcatctacattcagatcgc
gcaaaagcagctcaaaccgaggctatggatcgtttgctggaaaatcacctcctctactgt
acagtgtgcgataacaacaacggtaattgtaaactgcataacaccgcagagcttatggaa
attgaacatcaaaaatatccatatcgaccgaaggttgatcccacagaagtggatatgtcc
caccctttttaccgttatgatcccaatcaatgtattgcatgcggccaatgcgtagaggta
tgtcagaaccttcaggtcaatgaaacactgtccctcgactgggaggctgaacgccctcgc
gtgatctgggatgaaggagttgcaattaacgattcctcctgcgtcagctgcggtcagtgt
gtaacggtctgcccatgtaacgccttgatggaaaagtccatgctgggagaggccggcttc
atgagcggcataaataaggatttattaaatccaatggttgatctaattaaggaagtggag
ccaggctacagcggtatttttgcaatttcggaagctgaagcagcgatgcgtgaaacccgt
acgaaaaaaacaaaaaccgtctgcacgttttgtggtgtaggttgcagctttgaagtttgg
accaaaggccgcaaaattttgaaggtacaacctacctctgaggggcctgttaacggcatt
tcgacatgcgtcaaagggaaattcggttgggattttgtgaatagcgatcagcgtttgacc
tcgcctttaattcgtcaaggagacgaattcgtggaagcaacctgggaagaagccttgagc
ctgatggccagcaaaatgggagcgatcaaagaaacctacggcggcgaggcactcggcttt
atttcttcgtccaaatttaccattgaagaaaattatctgatgcaaaagctggctcgtcag
gtgttccaaacgaataacgttgataactgctcacggtattgccaatctcctgcatcatgg
ggtctacaatacaccggaggcatcggcggagacagcggtacgattaaagacattgcctca
gcaggtttggtcatactggtcggctgtgcgccgggagaaggacatcctgtgctggctacc
cgcatcaaacgtgcgcataagctgcatggtcaaaagctgatctcggtggacctgcgcaaa
catgaaatggcagaacgcgcagatctgttcatgcgtccgaagcaaggtacggattatgta
tggttatccgctgtagccaaatacatcattgagcaaaactggcatgatgctaaattcatt
gaggaacatgtaaatttctatcctgaatatttgaaattgctggagaacttcaccttggaa
ttcgccgaacaggaaactggcatttccaaagagacgctgattcaggtagcaaccatgatt
cacgaagcggatggcacggccatttgctggggtatgggcgtgacacaaaacatcgcaggc
tcctacacttcgattgcaattgccaacctgctgctggtgactggcaactttatgcgtccg
ggtgcaggcgcatatccgcttcgtggtcataacaatgtgcagggcgctgccgatatgggt
acgatgccagatattttccctggctatcagcccgtaacgaacgatgccattcgttccaag
ttcgaagcggcctacggcgtacaaattccaagccaacgcggactggacaacattcaaatg
ctggaagccattgagacgggtaagctcaaaggtatgtatatcgctggagaagaaatggca
tgggtggatgcggactccaaccatacccaagaaatgctggcgaatttggatttccttgtc
gttcaggatgtatttctgagcaagacagctgaattcgctgatgtcattttgccagccgta
ccttcactcgaaaaagacggaaccttcacaaacaccgaacgtcgcgtacagcgtttatac
gaggcgctccgccctgtaggagacagcaaaccggattggtggattttcagccaatttgcc
aagcacatgggatttgattgggattacagtcatccgagtgaaatttttgaggaaatggcg
gcgctcactccatttttctcccaatgtaattatgacgtattggaaggctggaacagcttc
cattggggatcgccggatggtagtaacacaccgcttctgcataccaacggctttaacttt
ccagataaaaaagcacgcttgggacttttcgaatatgtaccaccaaaagagtaccccgct
gaattcgatctgaccttaaataatggtcgactgctcgaacaatttcatgaaggaaatatg
acgacaaagtcaacaggccttcagctcaaacttccaaaagtatttgtggaagtttcccct
gagttggctgaggagcgtggagttacagacggatcgctggttcggctggaatctccctat
ggtgcggtcaagctacgtgttctggtgacggaccgggtacagggaactgaaatttatgtg
ccaatgcactctaccagccatgagggtgctgtcaatctattaactggtggagcatttgat
gtcatcacccgtacaccagcctataaacaaaccaaagtacggatgcaaattttggagatc
gatggtcagaatccactgcctcgtatcaatccacgttataaaaagcggcatccgcaaaat
ggggttgaagtgaaccgtaagtggaatcgtcccggttacgtcgatttggtagatcaaaaa
taa
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