Paenibacillus polymyxa M1: PPM_3555
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Entry
PPM_3555 CDS
T01968
Symbol
yfiY
Name
(GenBank) putative HTH-type transcriptional regulator ybbB
KO
K02016
iron complex transport system substrate-binding protein
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_3555 (yfiY)
Transporters [BR:
ppo02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron complex transporter
PPM_3555 (yfiY)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
CCI70364
LinkDB
All DBs
Position
complement(4114717..4116438)
Genome browser
AA seq
573 aa
AA seq
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MPLQEQTSLWSDTTIKMLDEFSGTLQTGSVLRETELTSNVLLLAYGGEGELAMNGEVCHI
GAFFAGHVVKGTSLTLTARSDDIYYIVIMYKASSMEGASLVLPSYRKHPLRTSFVQNSVT
QAEWIENAEKIVAKWRRGEGMERFHANALLQGMIYELVMDYEHGQGGEASDMVDVVASYI
ASHYRQNLELKELAALAGCSLRQLQRRFKQEKQLGLTEYVIQLRMESASRMLRHTDAPIG
EIADRMGYRDMYYFSRAFKKYYSVPPLRYRLDAASKTDIDYAHSLQRNRTASSYESAQGS
VICHMRGEYYVIGSPKRIAVLDVQYADHLLALGLSPAGSVGLANAVLHFPQTIRAGLQNT
ELLGTYEYPDLLAVERLSPDLIICTEVHEPHYEQLSRIAPVLMFKRNENWQTILTLFGEL
TGKREEAKRIIADYHRRTTLLSEELAPVLAGKSVALIRPLDSLVRVHSASHRTGAVLYHD
LGLPVPLFVAGTSDTAYHISVDRLPAVHASHYFLLSHELMQEGISATEQRVWGMLDTVER
QHIHSVDAATWIGCYGPTGINGIVDQIAQALLA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacaagaacagacaagtctatggagtgatacaacgatcaagatgcttgacgag
tttagcggtactttgcagacaggcagtgttcttcgcgaaacggaattaacttcgaatgtg
ttgttgctggcatatggaggggaaggggagcttgcaatgaatggtgaggtttgccacatt
ggagctttttttgctggtcatgttgttaagggaacatccttaacgctgacggccagatca
gacgacatttattatatcgtgatcatgtacaaggcttcttccatggagggagcctctctt
gttttgccttcatatcgcaaacacccgttgcgcacttcatttgtgcaaaattcggtaacc
caagcagaatggatcgagaatgcagaaaaaatcgttgccaaatggcgtcgtggcgaagga
atggaacgttttcatgccaatgcgttgcttcagggtatgatctacgaactggtcatggat
tacgaacatggtcagggaggagaagcgtctgacatggtggatgttgtcgcttcatatata
gcgtcgcattatcgccagaatctggagcttaaagagctggcagcccttgctggatgcagc
ttaagacagctgcagcgacgatttaaacaagagaagcagctcggactgactgagtatgtc
attcagttgcgcatggagagtgcatcgcggatgctgcgtcacacggatgctcccatcggt
gaaattgctgacagaatgggctatcgcgacatgtattatttcagtagggcgtttaagaaa
tattatagcgtccctccgctgcgttataggcttgatgccgcttcgaaaacagatatagac
tatgctcattccttgcagcggaatcgcacagcttcttcatatgagtcggcccaaggctcg
gtgatatgccatatgcgaggggaatactatgttatcggatctccgaagcgtatcgctgta
ctcgatgtgcaatatgccgatcatttgcttgcgctggggctctctccagcaggtagtgta
ggactagccaatgcagtgttacattttcctcaaacgatcagggcaggacttcagaatact
gaattactcggaacatatgagtaccccgacctgcttgcagtggaacgactatctccggat
ctaattatttgcaccgaggtacatgagccgcactatgaacagttaagccggatcgctcca
gttctcatgtttaagcgcaatgaaaactggcagactattctgactctgttcggtgaactg
acaggcaaacgagaagaggcaaagcgtattatagcggattatcaccgacgaaccacattg
ctgtccgaagaacttgctcccgttctggcaggcaagagcgtggcactgatccgtccgctg
gattctctggttcgcgtgcattctgcctctcatcgtacaggggctgtgctgtaccatgat
ctaggtctgcctgttccgttattcgtggcaggtacctctgacacagcctatcacatctca
gttgacagactaccggctgtacatgccagccattacttcttgcttagccatgaactcatg
caggagggaatatccgcgacagagcaacgtgtctggggaatgcttgataccgttgagcgc
cagcacatacactcggtcgatgccgcgacatggatcggctgttatggacccacaggcatc
aatggcattgtggatcagatcgctcaggctttgttggcttga
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