Paenibacillus polymyxa M1: PPM_3668
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Entry
PPM_3668 CDS
T01968
Symbol
ydeE5
Name
(GenBank) putative HTH-type transcriptional regulator ydeE
KO
K13653
AraC family transcriptional regulator
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_3668 (ydeE5)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PPM_3668 (ydeE5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GyrI-like
Cass2
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
CCI70477
LinkDB
All DBs
Position
complement(4231821..4232741)
Genome browser
AA seq
306 aa
AA seq
DB search
MDTFNYCYSIDEGGHIVDLLKSMNEAIKYIEENLTNEIDFKEVARLAYCSEFHFKRMFSF
LAGATLSEYIRRRRLTLAAFELKDSNIKVIDIAIKYGYNSPDSFARAFQNLHGLTPSEAR
INGRSLKAYPRMAFQLSIKGGSEMNYRIEEKGAFRIVGIQKRVPIIFNGVNPEIAAMWES
LDGETINNLKRISNIEPMGLLSASTNFSEGRMEEKGELDHYIGVATTKECPDNLTQLKVA
ASTWAVFEAIGSFPDALQDVWGRIYSEWFPSSNYEQIEGPEILWNENKDITSPNFKSEIW
IRILKK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatacattcaactactgttattctattgatgaaggaggtcatatagtggatttgctt
aagagcatgaatgaagcaatcaagtatattgaagaaaacctgactaacgaaattgacttt
aaagaggtagcaaggctggcttactgctctgaatttcattttaaaaggatgttttctttt
cttgcaggtgctacgttatcagaatacatccgccgcagacgcctcactcttgcagcattt
gagcttaaagatagcaacataaaggtcatagatatcgcgattaaatacgggtacaattca
ccagattcttttgcaagagcttttcaaaatttacatggcttaacgccgtctgaagccaga
attaatggccgttcacttaaagcatatccacgaatggctttccagttatcaattaaaggg
ggaagtgaaatgaactatcgaattgaggaaaaaggggcatttcgcatcgttggtatccaa
aaaagagttcccattattttcaacggagtcaatccagagattgctgcgatgtgggaaagt
ttagatggtgaaacgatcaataatcttaaaagaatttctaatatcgagcctatggggttg
cttagtgcatccacgaacttttctgaaggtagaatggaggaaaaaggggagcttgatcac
tatattggcgttgcaacaacaaaggagtgtccggataacctaacacaacttaaagttgct
gcctcaacatgggcagtattcgaagcaatcggatcatttcctgatgcgctacaagatgtg
tggggacgtatttattccgaatggtttccatcctcaaactatgaacaaatagaaggcccg
gaaatcttgtggaatgagaataaggatataacctcaccgaatttcaaaagtgaaatatgg
atacgaatcttaaaaaagtaa
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