Paenibacillus polymyxa M1: PPM_3731
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Entry
PPM_3731 CDS
T01968
Symbol
pel1
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00040
Pentose and glucuronate interconversions
ppo01100
Metabolic pathways
ppo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPM_3731 (pel1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPM_3731 (pel1)
Enzymes [BR:
ppo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PPM_3731 (pel1)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CCI70540
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All DBs
Position
4294758..4296041
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AA seq
427 aa
AA seq
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MKKRCSLGIAAVLLFATLAPMGAPAHAASDIGKETLGSKNGWAAFSTGTTGGAAATSSNT
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINANVDDNNKPLGLNDYKDSKYDFNAYLKAY
DPSTWGKKVPSGTLEDARKASQKNQASRIVIEIPSNTTIVGLGNNAVINGANFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITINGATHVWVDHNTFNDGAHPDSG
NGTFYGQEYQHHDGLLDVINQGDLVTISYNHFYDHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPTLYIWGAGKASKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKTEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagatgttcactcggaatcgcagccgtgttattgttcgctactctggctcct
atgggtgcacctgctcatgcagccagcgatattggcaaggagacactcggcagcaaaaac
ggctgggccgccttttctactggcacaacaggtggagctgctgctacttcctccaatact
ttcaccgtaacgaaccgtaaacaacttgtcgatgcgttaggcaagagcagcaacactaca
cctaaaattatttatgtcaaaggtacaatcaatgctaacgtcgatgacaataataaacca
ttaggattgaacgattacaaggactctaagtatgatttcaatgcgtatctcaaggcgtat
gatccgtctacatgggggaaaaaggttccttctggtacattggaagatgcacgtaaggca
tcacagaagaatcaagccagtcgtatcgttattgaaattccatccaatacaacgattgtc
ggtctgggcaacaatgccgtcattaatggtgcaaacttccaattaaaaaagggtacagac
aacgtcattatccgtaatattgagtttcaggatgcctacgattatttcccacaatgggac
ccaactgatggcagtacaggcaattggaattcagaatatgacagcattacaattaacgga
gccacgcatgtatgggtggatcacaatacgttcaatgacggggctcaccccgatagcgga
aacggcaccttctacggtcaagaataccagcatcatgatggactgctcgatgtgattaac
caaggtgatctggttaccatttcatacaatcacttttacgatcatgacaaaacatccatt
atcggcaacagcgacagtaaaacagcggatgaaggggctttacgtgtaaccctgcatcac
aattattatgagaatacagtacaacgcacaccgcgcgtacgttatggacaagtccatcta
tataacaattactatacaggtgatgtaaaacgctctgaataccctacactgtatatatgg
ggcgcgggcaaagcctctaaaatctttgctgaaaacaatgtcattgacgttgcgggactg
tccgcagccaaaattgtgactgtttttggtggaactgccctgtcagacactggcacactt
ctgaatggacaggccgtaaacgcaggctccagcgcggggcttagctcctctgtaggctgg
aagccatccttgaacgataaaatttccccatccgccagcgtgaagacagaagtcacttcc
caagccggttccggcaagttgtaa
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