Paenibacillus polymyxa M1: PPM_3840
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Entry
PPM_3840 CDS
T01968
Symbol
yvcC3
Name
(GenBank) Lipid A export ATP-binding/permease protein msbA
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo01501
beta-Lactam resistance
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_3840 (yvcC3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PPM_3840 (yvcC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_3840 (yvcC3)
01504 Antimicrobial resistance genes [BR:
ppo01504
]
PPM_3840 (yvcC3)
Enzymes [BR:
ppo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
PPM_3840 (yvcC3)
Transporters [BR:
ppo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPM_3840 (yvcC3)
Antimicrobial resistance genes [BR:
ppo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
PPM_3840 (yvcC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
ABC_membrane_2
AAA_29
AAA
ABC_ATPase
AAA_22
SbcC_Walker_B
AAA_23
AAA_25
DUF5906
AAA_15
DUF7318
Motif
Other DBs
NCBI-ProteinID:
CCI70649
LinkDB
All DBs
Position
complement(4438128..4439945)
Genome browser
AA seq
605 aa
AA seq
DB search
MEKEHHGRQDEQEDRTKEKPGKRPDKAGMGRFIKLIASAHPPKAILIIALILTLIQTIAG
LIVPMMTKGLIDGLTFSSLNRMVIIGLLGAFVLQAVASAVSIYMLNYAGHKIVANLRKRL
WHKILSLPIPYFDRNRSGDTMSRVTNDTSLIMNLITEYLVNLISNVIAIIGGIALLFYLD
WVMTLIIMTIVPLTALILFPVGRKMYRISKKQQDEMADLTSVLSQVIGEIRLVKAYGTES
REAQAGEDRIYRMFRFGLQESRILALVGPISTFLLTAVLVIILGVGGVRVASGVLTAGDL
VAFILLLFQVITPMAQFTTLYSRLQKVVGATERIQTILDHEEEPLELKQEAAKESRDIVF
RDVAFSYTEGEEVLHHANLVIPANRTTAFVGPSGSGKSTLFSLLERFYVPDTGEIRYGDE
SISSYTLSSWRSKIGYVSQESSMMTGTVKDNITYGLGREADLEEVRRAAMMAYADTFIMD
LPQGYDTEVGERGMKLSGGQRQRIAIARALLRSPDILMLDEATSSLDSSSEHEVQKALAN
LMEGRTTIVIAHRLSTVVHSDQIIVLDKGNVTGAGTHTELLETHQVYRELAQKQFVEMGE
KLHTL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaacatcatgggcgacaagatgagcaggaggatcggacgaaggaaaagccg
gggaaaaggccggataaggctggtatgggtcggtttatcaaactgattgcgagtgcacat
ccgcccaaggccattctgatcattgccctgattctgaccctgattcagacgattgctggt
ttaatcgtaccgatgatgaccaaagggttaattgatggcttaaccttttcttcactgaac
cgtatggtcattattggtctgcttggcgcttttgtgcttcaagcggtagcttcggcggtt
tcgatttatatgttgaactatgccgggcataagattgtggctaatttgcgcaaacgttta
tggcataaaatcttatctctacctatcccttactttgatcgaaatcggtcaggagatacg
atgagtcgagttaccaatgatacaagcctgattatgaacttaattaccgagtatctagtt
aatctgatctctaatgtaattgcaattattggtggtattgcgttgttattttatctggat
tgggtgatgacgctcattattatgaccattgttccgctaacagccctgattttatttccg
gtaggcagaaaaatgtatcgtatctccaaaaaacagcaggatgagatggcagatctgacc
tcagtactgagtcaggttatcggcgaaatcaggctggttaaggcctacggaacggaaagc
agagaggcacaggccggggaggatcgcatttaccgtatgttccgcttcgggttgcaggag
tcacgtatattggcccttgtgggtcctatttctacctttttgctaactgcggtgctggtt
attatattgggtgttggcggtgttcgcgtcgcatcgggtgtactgaccgcaggggatttg
gtggcttttattttgctactatttcaggtgattacgccgatggcccaattcacgaccttg
tattcacgtctgcaaaaggtggttggggccactgaacggattcagactattttagatcat
gaagaggaaccacttgaattgaaacaggaagcggcaaaagagagcagagacattgtattt
cgtgatgttgctttttcctataccgaaggtgaggaggttcttcatcatgcaaacctggtc
ataccggctaaccggacgacagcattcgtggggccgagcggaagtgggaagtccaccttg
ttttcattgttggaacgcttttatgtgccagatacaggggaaattcgttacggagacgaa
tcgatatcttcatatacactttcctcctggcgctccaaaattggttatgtatcacaggaa
agctcaatgatgaccggaacggtcaaagataatataacgtatggtttagggcgcgaagct
gatttggaagaagtgagacgagctgccatgatggcgtatgcggatacatttattatggat
ctacctcaaggctatgatacggaggtaggggagcggggaatgaagctctccggcgggcag
cgtcaacggatcgccattgcacgtgcgcttcttcgcagccctgacatcctcatgctggat
gaggctacttctagcctggacagctcatccgagcatgaggtgcagaaggccttagcgaac
ttgatggaaggacgtacgacaattgtcattgcacaccgattgtctacagtggtccactcc
gatcaaattattgtgttggacaagggcaatgtaactggtgcagggacccataccgagtta
ttagagacgcatcaggtgtaccgcgagctggctcaaaagcagtttgtggagatgggagaa
aagctccatactttgtga
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