Paenibacillus polymyxa M1: PPM_3843
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Entry
PPM_3843 CDS
T01968
Symbol
aspS3
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPM_3843 (aspS3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppo01007
]
PPM_3843 (aspS3)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_3843 (aspS3)
03029 Mitochondrial biogenesis [BR:
ppo03029
]
PPM_3843 (aspS3)
Enzymes [BR:
ppo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PPM_3843 (aspS3)
Amino acid related enzymes [BR:
ppo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PPM_3843 (aspS3)
Transfer RNA biogenesis [BR:
ppo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PPM_3843 (aspS3)
Prokaryotic type
Other AARSs
PPM_3843 (aspS3)
Mitochondrial biogenesis [BR:
ppo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPM_3843 (aspS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
CCI70652
LinkDB
All DBs
Position
complement(4442418..4444196)
Genome browser
AA seq
592 aa
AA seq
DB search
MKRSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGDALQ
IADRVRSEYVLEVTGTVVKRDAETINSNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEV
DESLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDY
LVPSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQIDIET
SFMQQDDLLPMMERLMVKLFKETVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELVNV
NDIVATSGVKVFASVIEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARYGAKGLAWIQVKE
GEFKGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIGRHLGLID
DKKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQAYDIVLNG
YEVGGGSMRIFKREIQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIAFGFDRLVM
LLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKPVAPKA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggagtcatcaatgcggcgcattgactcatgcgcatatcggagaaacagttaca
ttgaacggttgggtacagacccgtcgtgacttagggggcgtactttttatagacctgcgt
gaccgtagcggaattgtacaaatcgtgtttaatccggcctattccggtgacgcactgcaa
attgcggaccgtgttcgcagtgaatatgtgctagaggttactggtaccgttgttaaacgt
gatgcagaaacgatcaattcgaacttgcctacaggtgaaattgaagtgcgtgtcacagaa
atcgaagtattgaatgcatccaaaacacctccgttcttcattgaagatggcgtagaagtt
gacgagtcgctgcgtttgaaataccgttatctggacctgcgtcgtccggaaatgcatcag
actttgaaactgcgttccaaagcagcaaaagtattccgcgacttcctggacggtgaagat
ttcattgaagtggaaacaccgattttgacgaaaagctccccagagggcgcacgtgactat
ctggtgcctagccgagtgcatgaaggcgaattttttgccttgccgcaatcgccacaattg
tacaagcaattgctgatggtgggcggcctggagcgctactaccaagttgcacgttgtttc
cgtgatgaagatttgcgtgctgaccgccagcctgaatttacgcagatcgacattgagact
tccttcatgcaacaggatgacttgctgcctatgatggagcgtctgatggtgaaattgttc
aaagaaacagttggggtagaactggaaacaccgttccaacgaattacacatgcagaggca
atggacaagtatggttctgacaagcctgacctgcgttttggtcttgagctggtaaatgtt
aatgatatcgtggcaaccagtggagtgaaagtatttgcttccgtcattgaaaagggtggc
gaagttaaagtccttaatgccaaaggatgtggcacgtggagccgtaaggacattgatgac
ctgggtcctttcgcagcgcgttatggagccaagggcttggcttggatccaagtgaaagaa
ggcgaattcaaggggcctatcgttaaattcttcacaccagaagaaatcgaagccttgaaa
gaacgtacgggagccgaagaaggcgatctgttgctgttctctgcggataataaaaaagta
gttgctgatgttttgggcgcgcttcgtctgaaaattggccgtcatttggggctcatcgac
gataagaaattcaaatttgcctgggtcgtagacttcccgcttctgggctatgatgaagaa
caaaaacgttatgtagcggagcaccatccgttcactcgtccgaaggaagaagacctggcc
ctcttggacacagatccaggtcaagttcgtgctcaggcttacgacatcgtgctgaacggc
tacgaagtgggtggtggctcgatgcgtattttcaaacgtgaaattcaggagaaaatgttc
aaagcactcaacctgccgcctgaagaagtgaaggataaattcggttacttgctggatgca
ttcgaatatggtacgcctccacatggtggtattgccttcggttttgaccgtcttgtcatg
ctgcttgcaggtcgtacaaatctgcgtgaaaccattgcattcccgaaaacagccagcgcg
acagacctgcttatggatgcaccagccgaagtggatcaagctcaattggatcagcttcat
attcgtcttgctccgaagcctgttgcgcctaaagcttaa
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