Paenibacillus polymyxa M1: PPM_3866
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Entry
PPM_3866 CDS
T01968
Symbol
ruvC3
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PPM_3866 (ruvC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_3866 (ruvC3)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
PPM_3866 (ruvC3)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PPM_3866 (ruvC3)
RecFOR pathway proteins
PPM_3866 (ruvC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF1565
Motif
Other DBs
NCBI-ProteinID:
CCI70675
LinkDB
All DBs
Position
complement(4471108..4471611)
Genome browser
AA seq
167 aa
AA seq
DB search
MRFLGIDPGIAIVGFGFVDKIGSKVVPVQYGCIQTEAHTPEEDRLLHVYEGMLQLIDKYK
PDAVALEKLFFNRNVTTAMSVSQARGVLVLAAKQRNLPIGEYTPMQVKQAIVGYGKAEKK
QVQEMIRMFLKLQAVPKPDDVADALAVAICHAHSYGLNSKLNEVLRK
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttttttaggaattgatcccggtattgccattgtgggcttcgggtttgtagacaag
ataggcagtaaggtggttcctgtgcaatatggctgtatccagacggaggcccatacaccg
gaagaagacaggttgcttcatgtgtatgaaggcatgttgcaattaattgataagtataag
ccagatgcggtagcattggagaagctcttttttaatcgcaatgttacaacggctatgtct
gtaagccaggcacgtggggtgctggtactcgctgccaaacaacgtaatttgcctataggt
gaatacacgcccatgcaggtaaagcaggctattgtagggtatggcaaggcggagaagaag
caggtacaggagatgattagaatgtttctaaagctccaggctgtgcccaaaccggatgat
gtagcggatgctttggcagtggctatttgtcatgcgcattcctatggactaaattcaaaa
ttaaatgaggtattacgaaaatga
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