Paenibacillus polymyxa M1: PPM_4021
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Entry
PPM_4021 CDS
T01968
Symbol
licR1
Name
(GenBank) putative licABCH operon regulator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_4021 (licR1)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Other transcription factors
BglG family
PPM_4021 (licR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
Mga
HTH_11
HTH_DeoR
HTH_Mga
PuR_N
DUF6398
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
CCI70830
LinkDB
All DBs
Position
4645924..4647849
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AA seq
641 aa
AA seq
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MRIFDILRILVAEQMIKGEHLANALKVSSRTIRTDVKELNALLSRHGAAVKPLKGTGYRL
EIQDEQAFHHLLKQLKDYENNVPHLLASSSEARHRFLIKKLLLTHAYVKLDDLAEMLYVS
RSTLQNDLKEVRKLLSTYGLSLENRPYHGIRIKGNEAKLRYCISDYIFNRTDEIGGQQMP
HPSLISNEELEFIREVILERIEYHDIQLSDIALNNLVIHIAIACKRIREERYVSYYPQEM
KKIEAQKEFRVATEIVSALEQNMKHSFPLVEIAYIAVHLLGVRTVVRVHMDEVEIKKIID
KNIYELTIEILDRIDQQLNMNIQNDQELLIAFCLHLKPVLNRYQYGMNLRNPMLDEIKAH
YPLAFEAGIIAAEVIKQRLHIHIEDNEIGYLAIHIGVAMERKKMEGTPKRCMIVCASGLG
SAKLLYYKLQSVFGSRLEIVGTTEFYKLKQTPLDGLDFIISTIPISEPLSIPMIHVNTFL
GSSDITKIEQTISESKLPAVQYVRKKLVFLQQKFDNKRQALEFMAEKIQEAGLVKGPLLQ
SVIEREAVSPTSFGNFVAIPHPLEPFADSTFWAICTLQKAIDWDGKPVQFICMLCIQRTK
SEDLQSMYHILLNILNHEKLVQQLIRCKTYTEFVEVLHKNS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtatttttgatattctacgtatattggttgctgaacagatgatcaagggtgaacat
ttggcgaatgcattgaaggtatcttctcgaaccatacgaacagatgtaaaggaattgaat
gcactgttgtcacggcatggagcggctgtcaaaccccttaaaggaacaggctacaggcta
gagattcaggacgaacaagcatttcatcatctgctaaagcaattaaaggactatgaaaac
aatgtgccccatctattagcgagttcttctgaagccagacatcgttttttaataaaaaaa
ctgctgcttactcatgcatacgtcaaacttgatgatttagctgagatgctgtatgttagc
cgatctactttacagaatgacctcaaagaagtgcggaaattactgtcaacttatggacta
tcgctggagaacagaccgtatcatggtattcgaattaaggggaatgaggccaagctgcgt
tattgcatttccgactatatatttaacaggacagatgaaataggcgggcaacagatgccc
cacccttctttgatctctaacgaagagctggaattcataagagaagtgattctggagcgg
attgagtatcatgatattcagttgtcagacattgccctgaacaatctggtcattcatatc
gctatagcatgtaagcgtattcgtgaagagaggtatgtatcgtattatcctcaagagatg
aaaaaaatcgaagcgcaaaaagagtttagggtcgcgactgagatcgtatctgctctggaa
cagaacatgaaacactcctttccacttgttgaaattgcgtacattgctgtgcacttgctg
ggtgtaaggaccgttgtcagggtccatatggatgaagtagagattaaaaaaattattgat
aaaaatatttacgaactgacgatcgaaatattagaccgaatcgatcagcagttgaacatg
aacattcaaaacgatcaagaattgctgattgcattttgccttcatctcaaaccagtcctg
aatcgttatcaatacggaatgaatttgcgcaaccccatgctggatgaaatcaaagcccac
tacccgcttgcttttgaagcaggcatcattgctgcggaagttatcaaacagcgacttcat
atacacatcgaggacaatgaaattgggtatttagccattcatatcggagtcgcaatggag
agaaagaaaatggagggcacacccaaaagatgtatgatcgtatgtgcttccggactcggc
agcgcaaagctgctgtactacaagcttcaatctgttttcggttccaggctggagatcgta
ggaaccactgaattttataagttgaagcaaacgccgttggatggcctggactttattatt
agtacgatccccatatcagaaccgctttctatccccatgatccatgtgaatacatttttg
ggcagttcggatattaccaaaattgaacaaaccatctcagagtcaaaacttcctgctgta
caatatgtacgaaaaaaattggtctttcttcagcagaagtttgataacaaacggcaagca
cttgaattcatggccgaaaaaatacaagaagcaggtcttgtaaaaggtccattgttgcaa
tctgtgatagagcgtgaagctgtttcccccacttcatttggcaactttgtcgcgattccg
catccgctggaaccttttgctgattcgacgttttgggccatttgtacattacaaaaagct
atcgactgggatggcaagcccgtacagtttatttgcatgctctgcatacagcgcaccaaa
tcagaagatttacaaagtatgtatcatattttgcttaacattttaaatcatgaaaagcta
gtccagcagcttattcgctgcaaaacgtacacggaattcgtagaggtactgcataaaaat
agttga
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