Paenibacillus polymyxa M1: PPM_4071
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Entry
PPM_4071 CDS
T01968
Symbol
sdhA3
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00020
Citrate cycle (TCA cycle)
ppo00190
Oxidative phosphorylation
ppo00650
Butanoate metabolism
ppo00720
Other carbon fixation pathways
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
ppo01120
Microbial metabolism in diverse environments
ppo01200
Carbon metabolism
Module
ppo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPM_4071 (sdhA3)
00650 Butanoate metabolism
PPM_4071 (sdhA3)
09102 Energy metabolism
00190 Oxidative phosphorylation
PPM_4071 (sdhA3)
00720 Other carbon fixation pathways
PPM_4071 (sdhA3)
Enzymes [BR:
ppo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PPM_4071 (sdhA3)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CCI70880
LinkDB
All DBs
Position
complement(4699631..4701376)
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AA seq
581 aa
AA seq
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MAASNIIVVGGGLAGLMATIKAAEAGVHVHLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDSVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTQ
HHRTAFAGATTGQQLLYALDEQVRRWESAGLVTKYENWEFLQAVLDDEGICRGICGQDLR
TMEVKTFAADAVILASGGPGIIFGKTTNSVINTGTAAGAVYQQGVRYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFSVCVDDG
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECEFQYHGANRLGANSLLSAIYGGMVAGPKAVEYIKGLKKSAQDV
ASSVFDAAVNQQTEKYERILHMDGKENAYVLHKELGEWMTNNMTVVRYNDKLEATIHKIK
ELKERYSNININDASRWNNAGAAFTRQLWNMMELAEAMTKGALLRNESRGAHYKPDFPDR
NDEDYLKTTIADWTPEGPQISYEEVDVSLIKPRVRDYSKSK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatccaatattattgtcgtgggcggcggtctggcaggtctaatggctacgatc
aaggcggcagaggcgggagtccacgttcatttattttctttggttccggtcaaaagatcc
cactccgtttgtgcgcaaggtggcattaacggtgcggtaaataccaaaggtgagggagac
tcaccctggattcactttgacgattcagtctatggcggtgactttctggcaaaccagccg
ccggtaaaagcgatgtgcgaagcggctccgggaatcatccatctcatggatcgtatgggg
gttatgttcaatcggacaccagaaggactgctggatttccgccgttttggcggtacccag
catcatcgcacagcctttgctggtgcgacgacaggacagcagctcctgtatgctctcgat
gagcaggtacgacgctgggaatctgctggtttggtgaccaagtacgaaaactgggagttt
ttacaggctgtactggatgatgaaggcatctgtcgagggatttgtgggcaagatttgcgt
acgatggaagtgaagacttttgcagcggatgccgttattctggcatctggtggtcccggg
attattttcggtaaaaccacaaattccgtcattaataccggcacggctgccggtgcagtg
tatcagcaaggcgttcgctatgcgaacggtgagtttatacagattcatccaacggctata
cctggtgacgacaagctgcgtctcatgtccgagtcggcacggggagagggcggtcgcatt
tggacgtataaagacggaaagccatggtatttccttgaagaaaaatatccggcttatgga
aatctggtccctcgcgacattgcgacacgtgaaatattcagcgtatgcgttgatgatgga
ctgggtattaacggcgagaacatggtctatctggatctgtctcacaaggacccgaaagag
ctggatgtaaagctgggcggcattattgagatttatgaaaaatttgtcggcgacgatccg
cgtaaaatcccaatgaaaatattcccggctgttcactattcaatgggcggcatgtgggtc
gattacaaccaaatgacaaatataccgggtctgttcgcagctggtgaatgtgaattccag
tatcacggagcgaaccgcttgggtgcaaactcactgctgtcggccatttatggcgggatg
gtggctggaccaaaggctgtggaatatatcaagggcttgaaaaagtctgcacaggatgta
gcttcttcggtatttgatgccgcagtcaatcagcagacggagaagtatgagcgcattttg
catatggacggaaaagaaaatgcctatgttcttcacaaagagctgggtgagtggatgacg
aacaatatgaccgtggttcgttataatgacaagctggaagctacgattcacaagatcaag
gagctgaaggaacgttactcgaacattaacattaatgacgcttcgcgctggaataatgcg
ggtgcggcgtttacacggcagttgtggaatatgatggaactggctgaagcgatgaccaaa
ggggcgctactgcgcaacgaaagccgcggggcccattacaagccggacttcccggatcgc
aacgatgaagattatctgaaaacgacgattgcagattggacaccggaaggaccacaaatt
tcgtatgaagaggtcgacgtttcactgatcaagccgcgtgttcgagattattccaagagc
aagtaa
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