Paenibacillus polymyxa M1: PPM_4120
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Entry
PPM_4120 CDS
T01968
Symbol
pbp3
Name
(GenBank) Penicillin-binding protein 2 PBP-2
KO
K21465
penicillin-binding protein A
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00550
Peptidoglycan biosynthesis
ppo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPM_4120 (pbp3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppo01011
]
PPM_4120 (pbp3)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PPM_4120 (pbp3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Big_10
CNOT11_N
P8_CR
Motif
Other DBs
NCBI-ProteinID:
CCI70929
LinkDB
All DBs
Position
complement(4752081..4754153)
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AA seq
690 aa
AA seq
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MDNEQGKDNETSDRKRFSFRINLFFFSSFIIFTVIIVRLAILQFVDGPQLKQQEASNVTK
NVPLTPIRGTIYDSTGQNRLAYSTPVQSLYITLSKNYSDGMEEKRDNDKKLLPELEKMTQ
KLANRFAEYGNKDEPKMTPEQIMDAMDRNYQRFSGFTPRLIKTNLTPEEVAYFMEHKSEF
PGVDVVEETVRHYDPDTVAVQTVGYIKSYKSARETLDKYKNIQKSMSAENDPGLIYMDNE
SVGFDGLEYQYQEQLRGKNGYKTVPIDPRNMPEGVDSVTPPQKGDNVYSTINKEIQVKTE
NAIMDQLRWLHTHAVSGRTHPYAKTGFAVAMEVDTGNVVAMASMPDYDANYWQTGTISKD
KYEEIKHVYQNATIKNVGSGQSGQHPDSTVLLGSTIKPLSVLIGLEEGLFTTNTYYQDTG
AAYFGRNNSARVRNSSGHVYGSMDPATAIRHSSNAFMVDMVGKRLYNKYRNNATEDQGIN
VWDRYMKEFGLGVSTGVDLPGEFRGWREYTNKSESVLSRLAYASFGQQGKYTPMQLAQYT
TMIATKGKRMEPHLVSQIKDTNGNVVQTFKPKVLNEVKFPDAYWNEVIRGMATDVSAFKG
FPYDFARKTGTSQQSVGRELKDNGVFIAFAPRQNPKLAVAVVIPEGGFGAWSAGPVARKI
FDAYDEVYGLDGVPKKKEATATDPNTTKQP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgagcaaggaaaagacaatgagacatccgaccgaaaaagatttagcttccgg
atcaatctgttctttttcagctcgttcattatatttacagtcattattgtaagattggcg
atacttcaatttgtagatggacctcagctcaaacagcaggaggccagtaatgttaccaaa
aatgtaccacttacgccgattcgcgggacgatctatgattccaccggacagaacagactg
gcgtattcgacacctgtacaatcgctgtatatcacgctctccaagaactacagtgatggt
atggaagaaaagcgtgataatgacaaaaagctattgcctgagctggagaaaatgacacag
aagctggcgaatcgatttgctgaatatggcaataaagatgagcctaaaatgacgccagaa
caaattatggacgccatggaccggaactatcaacgatttagcggttttacgcctcgtctg
attaaaaccaatcttactccagaagaagtcgcttattttatggagcataaaagtgagttt
ccaggcgtagatgtcgttgaagaaacggtacgccattacgatcctgacacggtagctgtt
caaacggttggttatattaaaagttataaaagtgcacgtgaaacgttggataaatataag
aatattcaaaaatccatgtcagctgaaaatgatccgggcctcatttatatggataacgaa
tctgtgggctttgacgggctggaatatcaatatcaggaacaattacgggggaaaaatggc
tataaaacagtacccattgatccacgcaatatgccggaaggtgtagattctgttactcct
ccgcaaaaaggggataatgtctattccactattaacaaagaaattcaggtgaagactgaa
aatgccattatggatcaattgagatggctccatacacacgctgtatctggcaggactcat
ccttatgcgaaaacaggctttgctgtagccatggaagtggatacagggaatgtagtcgcg
atggctagtatgccggattatgatgcgaattattggcaaacgggtacgatttcaaaagac
aaatatgaagagataaaacatgtgtatcaaaacgctacaattaagaacgttggctcaggc
caatctggacagcacccagattctaccgtgcttctcggatcaactattaaaccgctgtct
gttcttattggattggaagaaggactatttacgacaaatacgtactatcaagacacaggg
gctgcttatttcggacgtaataattccgcacgggtgcggaactcgtctggtcatgtgtac
ggttcaatggacccggctaccgctatacgtcattcctctaatgctttcatggtcgatatg
gttggcaagcgcctatataacaaatacagaaataatgctacagaagaccaggggataaat
gtatgggaccgttatatgaaggagtttggattaggcgtttccactggagtagacttgcct
ggtgagttccggggttggcgagagtatacgaataaatccgagtcggtactttctagacta
gcgtatgcttcctttggtcaacaaggtaaatatacacctatgcaacttgcccagtataca
acgatgattgcaacaaagggcaaacggatggagccgcatttggtcagtcaaattaaagat
accaacggtaatgtggttcaaacgtttaagccgaaggtgctgaatgaagtgaaatttccg
gatgcttactggaatgaagtcatacgcgggatggcaacagatgtcagcgcatttaaaggt
ttcccttatgactttgctcgcaaaacggggacatcacagcagagtgtaggcagagaacta
aaagataacggggtatttatcgcctttgcaccacgccagaatcctaaacttgcagtagca
gttgtcattcctgaaggaggcttcggagcttggagcgccggacctgtggcacgtaaaata
tttgatgcttacgacgaagtgtacggtctggacggggtgcctaagaaaaaggaggccaca
gcaaccgatcctaacactactaaacagccataa
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