Paenibacillus polymyxa M1: PPM_4298
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Entry
PPM_4298 CDS
T01968
Symbol
cydC
Name
(GenBank) Lipid A export ATP-binding/permease protein msbA
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_4298 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_4298 (cydC)
Transporters [BR:
ppo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PPM_4298 (cydC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
DO-GTPase2
AAA_16
RsgA_GTPase
AAA_29
NB-ARC
AAA_22
AAA_18
MobB
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CCI71107
LinkDB
All DBs
Position
complement(4954222..4955976)
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AA seq
584 aa
AA seq
DB search
MDKAWFELKGIRPVMLLLAALSLLQGAAVITQAIFLAKAVTVLFNKNPLVMAWPSLALFF
AAFAVRHTMIWLQRRTAGRFAEAAGASLRERLLARLFERGPGFAAQEGSGKLVTLALDGV
DRFRNYLEISIPRIIDMMAVTLLVLVYVFTLDMISGVILTTTMPILVCFFILLGLAARKQ
ADKQWRSYRLLSHHFTDSLRGLQTLRFLGRSRAHGETVGKVSDQYRTATMRTLRVAFLSS
FALDFFSMLSVAFVAVGLGLRLISGSVGLEAALAVLILAPEYFMPIRQLGSDYHASLDGK
EAWGAIRSILVAEDETIEPKTANDKGLDITGQDILKLSDVCFLNEDGSARLEHVSASAEP
HMNMIGIVGASGAGKTTLLSLLGGFTDPTSGELILNGCRLSVDTKAEWQRHIAYIPQHPY
LFSATLADNIRFYEPEASNQQVEWAIDAVGLRELVNGLPGGLDEPIGEAGRTLSGGQAQR
IALARALLSNRPIILLDEPTAHLDIETEWELKQTILSVLKHKRMFLATHRLHWMPDMDCV
WMMNQGRLEEVGSHQQLVAQKGEYYRLLTGMSEGGDGRYESNGQ
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggataaagcctggtttgaattaaagggcattcggccagtaatgctgctgctggccgcc
ctttccctgctccagggagcagcggtaattacacaagccatctttttggcaaaggctgta
acggttttgtttaataaaaatccgctggtaatggcttggccatcgctggcgttgtttttc
gcggcttttgcagtgaggcatacgatgatctggctgcaacgccggacagccggtcgtttc
gccgaagcagcaggcgcttccttacgggagcgtctgcttgcgcgtttgttcgagcggggt
ccgggttttgcagcgcaggaaggaagcggcaagttggtgacgctagcgctggatggtgtg
gatcggtttcgcaattatttggaaatatccattcctcgtataatagacatgatggctgta
accttactggtgcttgtgtatgttttcacattagatatgatttcaggtgtgattttgacg
actacgatgccgattttggtgtgcttctttattttactcggcttggcggcgcgaaagcag
gcagacaagcagtggcgttcctatcgtctattatcacatcacttcacggattcgttgcgt
ggcctacagacactaaggtttttgggacgcagtcgggcgcatggggaaaccgtagggaag
gtcagcgaccaataccgtacggcaacgatgcgtacgctgcgggtagcgtttctttcttca
tttgccctcgattttttcagcatgctgtcggtcgcttttgtagcagtaggcttggggctg
cgtctgattagtggttcggtgggactggaggcagcgcttgcggtgcttattctggcaccg
gaatattttatgcctatacgccagttgggatcagactatcacgcctcattggacggtaag
gaggcttggggagcgatacgctccattctcgttgcagaggatgaaacgatagagccgaag
acagctaatgataaaggattagacatcacggggcaggacatcctcaagctgtccgatgtg
tgttttcttaatgaagacggctccgcccggcttgaacatgtgtctgcaagtgctgaaccg
cacatgaacatgattggcatcgtcggagcgagcggtgcaggcaagacgacattgcttagt
ctgcttggcggctttactgaccccacttccggtgagctgatccttaatggatgccgatta
tctgtggataccaaagctgaatggcaacggcatattgcctatattccacagcatccttac
ctgtttagcgctactttggcagataatattcgcttttatgaaccggaagcatccaaccag
caggtagagtgggcgattgacgcggttggactgcgtgaactggtgaatggccttccgggt
ggattggatgagcctattggggaagcaggtcggacattgagtggagggcaggcgcagcgg
attgccttggcgcgggctttgcttagtaaccgtccgatcattttattggacgagcctacg
gcacatttggatattgagacagaatgggagttaaaacagaccattttgtccgtattgaaa
cacaaaagaatgtttcttgccacccatcggctgcattggatgccggatatggactgtgtc
tggatgatgaatcaaggccgtctggaagaggtaggttcccatcagcaactagttgcccaa
aagggagaatattaccgattgctgacgggaatgtcggaaggaggggacggacgatatgag
agcaacggacaatag
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