Paenibacillus polymyxa M1: PPM_4299
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Entry
PPM_4299 CDS
T01968
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00190
Oxidative phosphorylation
ppo01100
Metabolic pathways
ppo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PPM_4299 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPM_4299 (cydB)
Enzymes [BR:
ppo01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
PPM_4299 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
CCI71108
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Position
complement(4955976..4956989)
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AA seq
337 aa
AA seq
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MSLNDLWFLLIAVLFTGFFFLEGFDFGVGMATGLVPRNDQQKRLMINTIGPFWDANEVWL
ITAAGAMFAAFPHFYATMFSGYYLVFVFILLGLILRGVSFEFRGKAEGKGWTGTWDTCIL
IGSFLPPMLFGMAFAALVKGVPIQQNMDLKAGFLDVFNGYTVWIGLTVVGMCLMHGLTFI
SLRTIGEVRDRARVIASKFLPVLGILLAGMVVWTYFATDLFVRRGPFMYVAVAVGILAYV
LTWYFLRQRREGWAFGMTGVIILLSFVSLFVGLFPRFMVSSINSAFDLTIYNASSSHYTL
KAMTIVAATLLPFVLAYQAWSYFVFHKRLSEKDHLEY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgttaaatgatttatggttcttattgatcgcagtgttgtttacaggcttctttttt
ctagagggctttgattttggcgtggggatggcaacaggattagtgccgcgtaatgaccaa
caaaaacgtttgatgatcaatacgattggtccattctgggatgccaacgaagtgtggctg
attacagcagcaggtgcgatgtttgccgcctttccgcatttttatgcaacgatgttcagc
ggatattatctggtatttgtgtttattttgctaggtttgatcttgcgaggagtctccttt
gagttccgtggcaaggccgaaggaaaagggtggacaggaacgtgggatacttgcattctg
attggcagcttcctgccgccgatgctgtttggtatggcctttgcggctttggtgaaaggt
gtacctattcagcaaaacatggatttgaaagccggatttttggatgtgttcaatggatac
accgtatggattggactgacagtggtcggaatgtgcctcatgcacgggctgacgttcatt
tctctgcggacgattggtgaagtcagggatcgtgctcgtgtgatcgcgtccaaatttctt
ccggtgttgggaattctacttgctggtatggtggtatggacatattttgcaacggattta
tttgtacgtcgcggtccctttatgtatgttgcggttgcggtgggaattctcgcctatgtg
ctgacatggtatttcctgaggcagcgccgcgaaggatgggctttcggaatgacaggtgtc
atcattttgctaagcttcgtttcgttattcgttggcttgttcccaagatttatggtgagc
tcgatcaacagtgcttttgatttgacgatatataatgcaagctccagtcattacacactg
aaagccatgacgattgttgcagcaacgcttttaccctttgtgttggcttatcaggcgtgg
agctattttgttttccataagcgtctcagtgagaaggatcatctggaatactaa
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