Paenibacillus polymyxa M1: PPM_4478
Help
Entry
PPM_4478 CDS
T01968
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00900
Terpenoid backbone biosynthesis
ppo01100
Metabolic pathways
ppo01110
Biosynthesis of secondary metabolites
Module
ppo_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PPM_4478 (ispF)
Enzymes [BR:
ppo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
PPM_4478 (ispF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
CCI71285
LinkDB
All DBs
Position
complement(5182741..5183247)
Genome browser
AA seq
168 aa
AA seq
DB search
MGKDRGRGYQMIRIGQGFDVHQLVEGRPCIIGGVHIPYEKGLLGHSDADVLLHAISDAIL
GALGLGDIGKHFPDNDPEFKDADSLKLLEHVWGLAKERGYRLGNIDSTIIAQKPKMASYI
PQMNEIIARVLEAEESSQVNVKATTTEQLGFTGRGEGIAAQSVVCLIK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagacagagggagaggatatcaaatgatcagaatagggcaaggatttgacgtc
caccagctggtggaaggaaggccatgcatcatcggaggcgtacatattccgtatgaaaaa
ggtttgctgggccattccgatgcagacgtgctgctgcatgccattagcgatgccatcctg
ggcgcgcttggcttgggagacatcggaaagcattttccggataacgaccctgaatttaag
gacgctgatagcctgaagctactggagcatgtgtgggggctggctaaagagcggggatat
cgcttggggaatattgattctacgattattgcgcagaagcccaagatggcatcgtacatc
ccgcagatgaatgaaatcatcgcccgggtgctggaagcagaggagtcgtcccaggtaaat
gttaaggcgacaacgacggagcaactcgggtttaccgggcgaggcgagggaattgcggct
caatcggttgtctgtctaatcaagtaa
DBGET
integrated database retrieval system
