Paenibacillus polymyxa M1: PPM_4483
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Entry
PPM_4483 CDS
T01968
Symbol
radA
Name
(GenBank) radA-like DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_4483 (radA)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPM_4483 (radA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
NTPase_1
DUF7125
KdpD
nSTAND3
AAA_24
AAA_14
ADH_zinc_N
AAA
ATPase_2
NPHP3_N
HypA
SLFN-g3_helicase
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
CCI71290
LinkDB
All DBs
Position
complement(5187149..5188522)
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AA seq
457 aa
AA seq
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MAKVKTKFSCTECGYESPKWYGKCPGCQAWNSMVEETESVVKTQGMGSSLLTHSTKDKPL
PIIEVESGKETRILTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLMLQTSNELALTGL
KVLYVSGEESVRQTKLRADRLGALSPSLYVLCETNLETIEEAVDSLKPEFLVIDSIQTVY
LPEVTSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYF
EGERHHTYRLLRAVKNRFGSTNEIGIFEMAESGLREVANPSELFLSERPLGVAGSTVVAS
MEGTRPVLVELQALIAATHFPSPRRMGTGIDHHRMGLIIAVLEKRMGMFLQNQDAYLNVA
GGVKLDEPAVDLAIAVSIASSFRDAPTKPYDVIFGEVGLTGEVRAVSRAEQRVREAEKLG
FKRVIMPEKSLKGWTHPKGIQIIGVGTVADALAAALD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtgaaaactaaattttcctgtacggaatgtggctatgaatcgcctaaatgg
tacggaaaatgccctggatgccaggcatggaattccatggtcgaagaaacggaaagcgtt
gtaaaaactcaaggaatgggatcttcccttcttactcatagcacaaaagacaaaccgctt
cctattattgaagtggaaagtggcaaagaaacacgaattttaacgggaattggtgaatta
aatcgtgtacttggtggaggtgtggtgccaggttcacttgttctggtgggtggtgatccg
gggatcggcaagtctacgcttatgctgcaaacctctaatgagctggctttaactggttta
aaggtactgtacgtgtctggtgaggaatccgtccgccaaacaaagctacgtgcagatcgt
ctcggtgccttgtctcccagtctgtacgtattatgtgagacgaatttggagacgattgaa
gaagcagtagacagcttgaagccagagtttttggtcatcgactcgatacagactgtatat
ttgcctgaggtgacaagtgcgcctggtagtgtagctcaggtgcgcgagtgtacttcacga
tttatgcggattgccaagggattaggtattgctacagtactggtagggcatgtgaccaag
gaaggcgctattgcaggtccgcgtttgttggagcatatggtcgattgtgtactttatttt
gaaggagagcgtcatcatacgtatcggctgttgcgtgcggttaagaatcgctttggttct
acgaatgaaattggtatttttgaaatggccgaaagtggtttgcgtgaggtggcgaatcct
tctgaacttttcttgtccgaacggccactgggggtggcaggttccaccgtcgttgccagt
atggagggaacccgacctgtattggttgaactgcaagcactaattgcagctacacatttt
ccatctccacgccgaatgggtacggggatcgaccatcatcggatgggattaatcattgcc
gtcctagaaaagcggatgggcatgttcttgcaaaaccaggacgcttatctcaacgttgct
ggaggcgtgaagctggatgaaccagcggtggatttagctatagcggtgagcattgcttcc
agctttagggatgctcctaccaagccgtacgatgtgatttttggtgaagtaggactgaca
ggcgaggtgcgggctgtatcccgagcagaacagcgagtgcgagaagcggagaaattaggt
ttcaaacgggtaatcatgcccgagaaaagcttaaagggctggacacatccgaaagggata
caaattataggagttggaacggtggcagatgcactggcagctgcattagattag
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