Paenibacillus polymyxa M1: PPM_4490
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Entry
PPM_4490 CDS
T01968
Symbol
pcrA3
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03420
Nucleotide excision repair
ppo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPM_4490 (pcrA3)
03430 Mismatch repair
PPM_4490 (pcrA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_4490 (pcrA3)
Enzymes [BR:
ppo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPM_4490 (pcrA3)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPM_4490 (pcrA3)
MMR (mismatch excision repair)
Other MMR factors
PPM_4490 (pcrA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCI71297
LinkDB
All DBs
Position
complement(5202830..5205154)
Genome browser
AA seq
774 aa
AA seq
DB search
MQSIDIHEAVARLNQPQRQAVEAVDGPLLIMAGAGSGKTRVLTHRIAYLIATRKTAPWGI
LAITFTNKAAREMQDRVSKLIGPQGRDVWVSTFHSMCVRILRRDIERIGFTSNFSILDST
DQLSVIRSCMKDLNIDTKKFEPKAVQSMMSTAKNELVTPEMYERKIGDYFEGIVAKVYTK
YQQRLKNNNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCKML
ADKHHRLCVVGDSDQSIYRWRGADISNILNFEEDYPEARTILLEQNYRSTSNILNAANEV
IGQNTGRKPKKLWTDKEGGAKIKVYRADSEHDEGYFIASEIHKNIKAGKTYSHHAILYRT
NAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLIRIINVPKR
SIGDTTVGKLQAAAAERGVSIFRVLQVVDDLGFAGRTRNALVEFYDMIEGLSRMVDYLSV
TELTEKMLETTQYRLELQNENTLESRSRLENIDEFLSVTMEFEKGTEDKSLVSFLTDLAL
IADIDSMNDDEEEQSDAVVLMTMHSAKGLEFPIVFIVGMEEGVFPHSRAFLDNEELEEER
RLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLEEIPDELKEDTIIKRDRYRRSGN
VGGSYGGRGLGKSSGSNFGGERSFDTMSRSGSSASASPRVTVTTSSPAKPTSTASTGGPS
IFAAGDKVQHGKWGIGTIVAVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatagatatacacgaggcggtagctcgccttaatcagcctcagcgtcaggcc
gtggaggcggtagatggtccgctgctgattatggctggcgcaggcagtggtaagacgcgg
gtgctcacgcaccgaatagcttacctcattgcgacccgtaagacggctccatggggtatt
ttggcgattacctttacgaataaggccgcgcgtgaaatgcaggatcgcgtatccaagcta
attggcccgcaggggagagatgtgtgggtatccacctttcactccatgtgtgtgcgtatt
ttacgccgggatattgagcggatcggatttacctccaatttcagcatcttggattctacg
gatcaattgtctgtcattcggagctgcatgaaggacttgaatatagatactaagaagttt
gaacccaaagcggttcagtctatgatgagtacggctaaaaatgaattggtcactcccgaa
atgtatgagcgcaagattggcgattattttgaaggaattgtggcgaaggtatataccaag
tatcaacaacggctcaaaaataacaactctcttgattttgatgatctgatcatggcaacg
attcagctctttaaagaagtgcctgaggtgcttgatttctaccaaaagaaatttcaatac
attcatgttgatgaatatcaggatacgaaccgtgcgcagtacatgctgtgcaaaatgctg
gctgacaagcatcaccggctatgcgttgtaggtgacagcgaccaatccatctatcggtgg
cggggggcggatattagcaacattttgaactttgaagaggattacccagaagcacgtacg
attttgttggagcagaactatcgctcaacttcgaatattcttaatgcagctaacgaagtc
attggccaaaatacaggccgtaagccgaaaaaactatggaccgacaaagaaggcggtgcc
aagattaaggtttatcgtgctgactccgaacatgacgaaggctactttatcgcctcagaa
attcataagaatattaaggcgggcaaaacctatagccatcatgctattttgtaccgtacg
aatgcccagtcccgggtagtcgaggaaattttgattaaatcggatattccttaccaaatc
gtgggcggaatcaagttctatgatcgtaaagagattaaggatttactggcgtatcttcgc
ctactgtccaatcctgacgacgacatcagcttgatccgaatcattaatgtaccgaaacga
agcatcggcgacacaacggtcggcaaattgcaggcagctgcagcggaacgtggcgtttca
attttccgtgtacttcaagtggtagatgacttaggctttgctggacgcacgcgcaatgcg
cttgtagagttttacgatatgatcgagggtttaagtcggatggtggattatctgtcagtt
actgagctgaccgaaaaaatgctggaaaccacccaatatcgattagaactgcaaaacgag
aatacactcgagtcacgctcgcgtttggagaatattgatgagttcctgtcggtaactatg
gaatttgaaaaaggaacggaagacaagtcacttgtttccttcctgaccgatcttgctcta
attgccgatattgattccatgaatgacgatgaagaggagcagagtgatgcggttgtatta
atgaccatgcatagcgctaaaggactggagtttcctatcgtatttatcgttgggatggag
gaaggggtattccctcacagcagggcctttttggataatgaagagctggaggaagagcgc
agattggcgtacgtcgggattacccgtgctgaggagcagttgttcctcacatgcgcacag
atgcgcactctgtttggacgtaccacagctaacccgccttcccgctttctcgaagagatt
ccggatgagttaaaagaagatacgatcatcaagcgtgaccgctaccgtcgttcaggcaat
gtaggaggatcttatggtggtcgcggactgggcaaaagcagtggcagcaactttggtgga
gagcgctcgtttgatacgatgagccgtagtggctcgtctgcctccgcgtcgccccgcgta
acagtgaccacttcctcgcccgcaaaaccaacttcgactgcttcgacaggaggtccatcc
atttttgctgccggagacaaggtacagcatggcaaatggggaattggaaccattgtagct
gtaaaagggacgggcaatgatatggaacttcagattgctttccctgctccggtaggggtt
aagcgactgttggctggatttgcgccgattacaaaagtagagtaa
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