KEGG   Paenibacillus polymyxa M1: PPM_4582
Entry
PPM_4582          CDS       T01968                                 
Symbol
comFA
Name
(GenBank) ComF operon protein 1
  KO
K02240  competence protein ComFA
Organism
ppo  Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:ppo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppo02044]
    PPM_4582 (comFA)
Secretion system [BR:ppo02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   PPM_4582 (comFA)
SSDB
Motif
Pfam: Helicase_C DEAD ResIII AAA_30 Flavi_DEAD AAA_22 DUF4419 TPR_10
Other DBs
NCBI-ProteinID: CCI71389
LinkDB
Position
complement(5326919..5329039)
AA seq 706 aa
MKIAVYAVRYKGKWNLRLSVDIRVDMTWWLRKVKDQENAVERWVLLGDELPLSWGVSLCG
RFKGLAEMERWGDRQWWAYILSQLKNELVLESSNGERILSGGVENICIWDRQQGWISRTK
HGNEGRETIGTVRSIQNRKLATGVDGLDMEGLTGQANELTHLLAGRQLLVPEAEALLAEA
APDLEHTWRSAAQLAYLQGRLSFAAGLAPAPRARWSAARRHELRCNRCGSGKVHRTSCAS
CGRKACAYCETCLTLGRSRECSLLLRGTAKPAMPRVAEVTPAANLDRWGLSPAQRAAAEV
ALRFLAAPPRRVRKCSRSEGQWQRARELFRRSMRVRQELGAAAAHGSTLALNEQSSSKSG
ERAWGIAGRQLPDSAAKRFLLWAVTGAGKTEMMFPLLQHVLERGGTALVATPRRDVVLEL
VPRLAVAFPQVSMVTLYGGSAERWQRGQLTLATTHQLLRYRQAFDLVVIDEIDAFPYHND
PMLAFAAQAVCKQEGKFIFLSATPPRPLQKEAARGQLPHAKVPVRFHRHPLPVPIRLGTA
SVHHWLQKGQLPASFIQHLYISIQRGAQVFLFVTRISHIQGLVELLIRQLPDIPIAGTSS
QDEERTAKVRLFRGTEIRVLVTTTILERGVTVPRSDVYILDADSSLFDEASLVQMAGRAG
RSKDDPCGSVIFISPQWTSGQKRAIKQIKRMNALARKKGYLKVMKH
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgaaaattgcagtatatgcagtcaggtataaagggaaatggaatctccgattatctgtg
gatattcgagtagatatgacatggtggttgcgcaaagttaaggaccaggagaatgctgtc
gaaaggtgggtgttactaggagacgagcttcccttgtcttggggagtaagcctttgtgga
agatttaagggattagcagaaatggagcggtggggggatcggcaatggtgggcttatatt
ctttcacagctaaagaatgaactggttcttgagtcttctaatggagaacgaatcttatct
ggaggagtagaaaatatatgcatttgggaccgtcaacaagggtggatttctcgcactaaa
catgggaatgagggacgggaaacaataggaactgtacgttctattcaaaacaggaagctc
gctacgggagtagatggattggatatggaaggtttaacaggacaagcgaacgagctgact
catttgttggcaggacgccagttgctcgtacctgaagctgaagcactgctagcagaggca
gccccggatttggagcatacttggcgttcagctgcgcaacttgcatatctgcaaggccga
ctcagctttgctgctggtctggctccagcaccacgcgcgcgctggtctgccgcgcgtaga
catgaactccgctgcaaccgttgtggcagtggaaaggtgcaccgcacaagctgcgcatcg
tgcggccgtaaggcctgcgcctactgcgagacatgtctcacacttgggcgcagccgtgag
tgctcgctgctgcttcgcggtacagcgaaacctgccatgccgcgcgtggcagaggtaacg
ccggcggcgaatctcgaccgctgggggctgagtcctgcacaacgtgctgccgccgaagta
gcgctgcgctttttggctgcaccaccccgcagggtgcgaaaatgctcccgctcggaaggc
caatggcaacgagcgcgcgaattattccggcgcagcatgcgtgtgcgccaggaattaggt
gctgccgctgcgcatggcagcactcttgccctcaacgagcagtcatcgtccaaatctggc
gagcgtgcttgggggattgctggccggcaattacctgattctgcggccaaacgttttctg
ctctgggccgtgactggcgcaggcaagacggaaatgatgtttccgcttttacagcatgtg
ttggagcgcggagggacagcgcttgtagcaacaccacgccgagatgtggtattggagttg
gtacctcgcttggcagttgcctttcctcaagttagtatggtgacactttatggagggagt
gcagaacggtggcaaaggggacaactgacactggcaacaacacatcagctgttgcgttat
cgccaggcctttgatttggttgtaatcgacgagattgatgcatttccttatcacaatgat
ccaatgcttgcctttgctgcccaagcagtatgcaagcaggaagggaaatttatttttttg
tctgcgacgccgccgcgtcctttgcagaaagaggctgcacgtggtcaactgccacatgcc
aaggttcccgttcgttttcatcgtcatcccctacctgtccccattcgtttggggactgct
tcagtgcatcattggctgcaaaaaggccagcttcctgcttcatttattcagcacctatac
atatccattcaacgaggcgcgcaggtctttctgtttgtgacacgaatctcacatattcaa
ggtcttgtggaattgctgattagacaattgcctgatatacctattgccggcacttcatcg
caggatgaagaacgaaccgctaaggtgcgtttgtttcgaggtactgaaatacgtgtgctg
gtcacaaccactattttggagcggggtgtgactgttccacgaagtgatgtgtatatacta
gacgcggacagcagtctttttgatgaagcatcccttgtccaaatggctggtcgcgcggga
agatctaaggatgatccatgtggtagtgttatttttatatcccctcaatggactagcggt
caaaagagagcgattaagcagattaaacgcatgaatgcactggctcggaaaaaaggatat
ctgaaagtgatgaagcactaa

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