Paenibacillus polymyxa M1: PPM_4584
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Entry
PPM_4584 CDS
T01968
Symbol
degU
Name
(GenBank) Transcriptional regulatory protein degU Protease production enhancer protein
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02020
Two-component system
ppo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPM_4584 (degU)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPM_4584 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppo02022
]
PPM_4584 (degU)
Two-component system [BR:
ppo02022
]
NarL family
DegS-DegU (multicellular behavior control)
PPM_4584 (degU)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
XFP_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CCI71391
LinkDB
All DBs
Position
complement(5329846..5330568)
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AA seq
240 aa
AA seq
DB search
MENQEMSNAPIKVLLADDHQLFREGLKRILNMEDDIEVIGECGDGIQVLEFCNVEKPDIV
LMDINMPIENGVEATEKLREMFPDVKVIILSIHDDESYVFETLRKGANGYLLKDMEAESL
INAIRSVHEGYAFIHPKVTGKLIQQLRRMTYLNETGAMAEGHTKEAGVKFVAGENNPLTR
REAEVLRLMAEGKSNKMIGEYLFISEKTVKNHVSSILQKMEVDDRTQAVINSIKYGWVTL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcaggaaatgagtaatgcacccattaaagttctcttagcggacgaccatcag
ttgttccgtgaaggacttaaacgtattttgaatatggaggacgacattgaggtcatcgga
gaatgtggcgatggcattcaagtgttggaattctgcaacgtagagaaaccggatattgtt
ctgatggacattaatatgccaattgaaaatggtgtagaggcaactgaaaaactacgtgag
atgtttccggacgtcaaagtgatcattttatccattcatgatgatgaaagctatgtattc
gagacgttgcgcaagggggccaatggctatctgttaaaagatatggaggccgaatccctc
attaatgctattcgttcagtacatgaaggatatgcattcattcatccgaaggtaacgggt
aagcttattcagcagctccgtcggatgacttacctgaatgaaacaggggctatggcggaa
ggtcatactaaggaagcaggcgtgaagtttgtcgcaggtgaaaataatccactgacccgc
cgcgaagcagaagtgttgcgtctgatggctgaaggcaagagcaataagatgattggtgaa
tatttattcattagtgagaaaacagtcaaaaaccatgtaagtagcattttgcaaaaaatg
gaagttgatgatcgtacacaagcagttattaactccatcaaatacggatgggttacactg
taa
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