Paenibacillus polymyxa M1: PPM_4788
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Entry
PPM_4788 CDS
T01968
Symbol
kdgR5
Name
(GenBank) LacI family transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_4788 (kdgR5)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PPM_4788 (kdgR5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_26
HTH_3
SpoIIID
HTH_10
Fe_dep_repress
HTH_31
DUF952
HTH_IclR
GrdX
Sigma70_r4
HNF-1_N
HTH_6
Motif
Other DBs
NCBI-ProteinID:
CCI71595
LinkDB
All DBs
Position
complement(5554800..5555813)
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AA seq
337 aa
AA seq
DB search
MKKPTIEDVAQKAGVSKSTVSQFLNKRYKYMSDQTKDRIAEVIQELNYQPNGLARSLKQN
RTFMVGVIVANIDYTLSIQSIRAIEEELQRFGIQVIICNADENPDKESQYIEMLKARQVD
GLIIFPTGKHADIYNQLIREKYPLVFLDRLVDGVNTRSLLLDNEMAIKLAIQELVAHKHE
RIALITLPLGLNRITPRVERLSGYKKALEEHGLPFREEYMHSVPREEIQQTLKELFQLPE
PPTALLAGNDIVLAEALKYVNARRIRIPAELSIIGIDDAEFAHIYNPPITTITQPIADMG
KQAAKTLLSSIEEGGESVPIIYRFVPDINRGESVKTL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagccgacgattgaagatgttgcccagaaggcgggagtgtctaaaagcacggtc
tcgcaatttctgaacaaacgatataaatatatgagcgaccaaaccaaggaccggatcgcc
gaggttattcaagagctgaactatcagcctaacgggctggcccgcagcttgaagcaaaac
cggacgtttatggtgggagttattgtagccaacattgattatacgctgtcgattcagtct
atccgtgcgattgaggaggaattacagcgctttggcattcaggtgatcatttgcaacgcc
gatgaaaaccctgacaaggaaagtcagtatattgagatgctcaaggcccgccaagtggac
ggcttaatcatcttcccgacaggaaagcatgcggacatttacaaccagctcattcgggaa
aaatatccattggtgtttttggaccgcctggtggacggtgtcaatacacgcagcctgctg
ctggataacgaaatggcgattaagctggcgattcaggaacttgtggctcacaagcatgaa
cgaattgcgttgattaccttgccccttggcttgaatcggattactccacgagtggagcgg
ctcagcggatataagaaggcgctggaggagcatggcttgccatttcgtgaagagtatatg
cacagtgtgccgagagaagaaatccagcagacactgaaggaactgttccaactgccggag
ccgccgactgcactgttggccgggaatgatatcgtgttggctgaggcgttgaagtatgtg
aatgcccgccgtatacgtattccggcagaattgtccattatcgggattgacgatgcggag
tttgcccatatttacaatccgcccattacgaccattacacaaccgattgcggatatgggg
aagcaggcggcaaaaacgctgctgtccagcattgaggaaggcggcgagtcggttccgatt
atttaccgatttgtgccggatatcaatcgaggggaatccgtcaaaacgctgtag
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