Paenibacillus polymyxa M1: PPM_4882
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Entry
PPM_4882 CDS
T01968
Symbol
ydhQ
Name
(GenBank) HTH-type transcriptional regulator frlR
KO
K03492
GntR family transcriptional regulator, regulator of glucomannan utilization
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppo03000
]
PPM_4882 (ydhQ)
Transcription factors [BR:
ppo03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PPM_4882 (ydhQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
MarR
HTH_DeoR
HVO_A0261_N
HTH_11
HTH_41
HTH_Crp_2
WHD_TBPIP
Staph_reg_Sar_Rot
HTH_36
Motif
Other DBs
NCBI-ProteinID:
CCI71689
LinkDB
All DBs
Position
complement(5667908..5668618)
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AA seq
236 aa
AA seq
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MNKYQRIAQEVKKRIIDKTYSSDDPIPDEISLASEFRVSRMTIKRALDTLVSEGLLNRKR
GHGTFIVKSVYNGPVNVVVNEMLGLTNVLRGKEIKSKIIAFDVQFPSEEVAAHLFIDANS
PVYHVVRLRIVEGEPYVIERTYMPTKLISGITEQVLHGSVYKHIKEELGLNIVSSHRTIR
ASKSTELDWEHLDCGADDPVLEIEQVGYLDTGIPFEYSFSRHRYDKFVFTTVNRIR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaataaataccaacggattgcacaagaggtcaagaagcgtattatagataagacctat
agcagtgatgatccgatccccgatgaaatttcactggccagtgagttccgggtaagtcgg
atgacgattaagagggcattggatacattggtgtcggaagggctgttgaatcgtaaaaga
ggacacggaacctttatcgtcaaatcggtctacaatggtccggttaatgtcgttgtgaat
gaaatgctggggctgaccaacgtactgcgcgggaaagaaatcaaaagtaaaatcatagcc
tttgacgttcaatttccatctgaagaggtagcggcgcatctatttattgatgccaattct
cctgtgtatcatgtagtccgtctgcgtattgtagaaggagagccgtatgtgatagagcgc
acatacatgcctaccaagctgatcagcggtattaccgagcaggtgttgcacggctcagtg
tacaaacatattaaggaggagctgggccttaatattgtcagttcacatcgtaccatccgt
gcgtccaagtcgaccgagctagattgggaacatttggattgtggtgcggatgatccggtt
ttagaaattgagcaggtaggttatctggatacgggtataccgtttgaatactcattctca
cggcatcggtatgataaatttgtgtttaccacagtaaatcggatacgttga
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