Paenibacillus polymyxa M1: PPM_4906
Help
Entry
PPM_4906 CDS
T01968
Symbol
nikA
Name
(GenBank) peptide/nickel transport system substrate-binding protein
KO
K15584
nickel transport system substrate-binding protein
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPM_4906 (nikA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppo02000
]
PPM_4906 (nikA)
Transporters [BR:
ppo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Nickel transporter
PPM_4906 (nikA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
HRI2_3H
Motif
Other DBs
NCBI-ProteinID:
CCI71713
LinkDB
All DBs
Position
complement(5690479..5692116)
Genome browser
AA seq
545 aa
AA seq
DB search
MSVRHRKTATLMLVTLLLLSVILGCAKQENTPASTSTNGAANEKSITLSWPRDIGTMNPH
VYNPSQLFAQSMIYEPLVSYKQGGKLEPALAESWTISKDGKTYTFKLRKGVKFSDGTLFN
AAIVKKNFDAIMKNEKTHSWLGIVGVLDKTEAVDDSTFRMTLKEPYYPVLQDLSVVRPFR
FLGEAGFPDDGDTSKGIKKPVGTGPWMLDEYKQDEYATFKRNPNYWGTAPKVDKITVKII
PDGETRVMAFEKGDLDLIYGEGVISLDAFKQLRDTNQYVTTLSEPVGTRSLLLNSSNPKL
ADLRVRLALQHGFNKQAMVEGVTSGLEETADTVLSKNYPYTNVDLQPIGYDVEKSKALLD
EAGWKLPAGGTVREKDGQQMDFELIFDKTDPIQKAMAETIQAEWGELGVKVNLTGLELTV
QIKRLRSNQFDLYFWYNYGAPYDPHSFINVIAKKSFGISEVLSALPMKKDLDQQVHEALS
STDETKRQELYASILKTLQEQSAIVPISYIKKTAVYQKKITNFVFPANRDENPFEGIEIG
KQLKR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttcgacaccgcaagactgccacccttatgttggtgacactcctcttattatcc
gttattctgggctgcgcgaagcaggagaacacacctgcatccacctctactaacggagct
gccaatgaaaagtcgatcacgctatcgtggccacgggacattggtacaatgaatcctcac
gtatacaacccttcccaactttttgcacaatccatgatttatgagccgttagtcagctac
aagcaaggaggcaagctggagcctgctttggctgaatcttggaccatatccaaggacggc
aagacatatacgtttaagctgcgtaaaggtgtgaaattttccgatggaacgctatttaat
gcagcgattgtcaaaaagaactttgacgctattatgaaaaatgagaaaacgcatagctgg
cttggtatagtaggcgttctcgacaaaactgaagctgtagatgacagtacattccgaatg
acgctcaaagagccatactacccggttcttcaagatctgtctgtcgttcgcccgttccgt
tttttgggtgaagccgggttcccggatgatggtgatacgtccaaaggaattaagaaacct
gtaggtacaggaccttggatgctggatgaatacaagcaggatgagtatgcaacctttaag
cgtaatccgaattattggggtactgcaccgaaggtggacaaaattacggtcaaaattatt
cccgatggtgaaacacgtgtaatggcctttgaaaaaggcgacctggatctgatttatgga
gagggtgttattagcctggatgctttcaaacagcttcgcgacacgaatcagtatgttact
acgctgtccgagcctgttggcacaagaagcctgttgctcaactcgtccaatcccaagctg
gcagaccttcgggtacgtctggcactccagcatggatttaacaagcaggcgatggtggaa
ggcgtaacctcagggctggaggaaacagcggatacggttttatccaaaaactacccatat
acaaatgtggacttacagccaataggctatgatgtggaaaaatccaaagcattgttggat
gaggctggctggaagctgcccgcaggcggcacagtacgggagaaagacggacaacagatg
gattttgagctgattttcgacaagaccgatccgatccaaaaggcgatggctgaaaccatt
caggccgaatggggagagctgggtgtcaaagtgaatctgaccggactggagctgacggtt
caaatcaagcggcttagatccaaccagtttgatctgtatttctggtacaactatggtgcg
ccttatgatccgcattcctttattaatgttattgccaagaagagcttcggaatttctgag
gtgctgagcgcccttcccatgaagaaggatctggatcagcaagtacacgaagcgctctca
tcgacagatgaaaccaagcgtcaagaactgtatgcttcgattttgaagacgctccaagag
caatctgccattgtgcctatttcgtatattaagaaaacggcagtgtatcagaaaaaaatt
actaactttgttttcccagctaatcgggatgagaatccatttgagggaattgaaattgga
aagcaactgaaacggtga
DBGET
integrated database retrieval system
