Paenibacillus polymyxa M1: PPM_5010
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Entry
PPM_5010 CDS
T01968
Symbol
M1_5464
Name
(GenBank) DNA polymerase bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPM_5010 (M1_5464)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppo03400
]
PPM_5010 (M1_5464)
Enzymes [BR:
ppo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PPM_5010 (M1_5464)
DNA repair and recombination proteins [BR:
ppo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPM_5010 (M1_5464)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCI71817
LinkDB
All DBs
Position
complement(5799272..5799898)
Genome browser
AA seq
208 aa
AA seq
DB search
MCERKGLHDKEMDHPYVILPEEQAPDGIEHCEICELSKQRNRVIWGEGNPKAPLMMILDN
PGAREDREGNSFLCGTRETLQYGMREAGIDVNDVYVTYLLKCRPMRAYNKPEARAACLPH
LQIQLFQKQPLVLFGFGNVVAGAIFTNKEGASVKELRGSWYELQGTPISFTYHPLAVRRR
ANLLRFFVEDLKALKEKWKEIQLKQDID
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtgaaaggaaggggctacacgacaaggaaatggatcatccctatgtaattttacct
gaagaacaagcacccgatggtatagagcattgtgaaatttgcgagctatccaagcagcgg
aatcgtgtcatctggggtgaaggaaatccgaaagctccacttatgatgattctggataat
cccggagcccgggaggatcgggaaggaaattcgtttttatgcggtacccgagaaacacta
caatacggcatgagagaggctgggatagacgtaaatgatgtttatgtcacctatttgcta
aaatgccgaccgatgcgtgcctataataaacccgaggctagagcggcgtgtctccctcat
ctacagatacagctttttcagaagcagccgcttgtattatttggatttggtaatgtcgta
gcgggagccatatttacaaataaggagggtgccagtgtcaaggagttacgaggcagctgg
tatgagttgcagggtacgcccatcagcttcacctatcacccgcttgcagtaagaagacga
gccaatttacttaggttcttcgtagaagatttaaaagctttgaaggagaagtggaaagag
attcagctcaagcaggatatagattga
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